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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6tbuA_

Fold library idPDB HeaderMoleculeTitle
c6tbuA_3.16PDB header: membrane proteinChain: A: PDB Molecule: protein dispatched;


Added to library: Sat Jun 6 08:49:04 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SERMNWYYHVLARRPYLVVVSIAVYCVACIIVALVLNKLPDFSDPTLGFETRGTKIGERLTAWYNLLQET
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Known secondary structure (DSSP)


S




S
SS
S
SBTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DHHGALFSNPSDLWESSPRKEYSHFVVQRINATDSLFDLNGLLAMCQLQDQITEVPSYRAFCEPEMLTTE
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Known secondary structure (DSSP) SSSSS
BSS





TT





SSSTSTTS


TTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence CCRPWSLPNYAAMLANKSSCFDLTTEDVTSLHTLLLGCYEKRLNIVFNVLNFLTDFSFIVYLKYAMIFIP
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Known secondary structure (DSSP)



BSSSS
TT








TTS
STT



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence VAQSNRLLPLFHEWEDVELINELVEVVAMDLGLENELFNELLLTDVWLVSLGGTFVMASVWLYTGSAFIT
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Known secondary structure (DSSP)

SS
S
S

SS
S


 .........290.........300.........310.........320.........330.........340.........350
Sequence LMSCVAICFSLGLAYFFYAIVLEFEFFPYMNLLAVVVIIGIGADDVFLFLKIWHCVLTESLENIMALTMR
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Known secondary structure (DSSP) TTT





STT

 .........360.........370.........380.........390.........400.........410.........420
Sequence HAAASMFVTSLTTAGAFYASYSSSITAIKCFGIFAGTVVVTNYLLMITWLPASVSIMERLFKKSINRFCQ
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Known secondary structure (DSSP) GGGSSB

 .........430.........440.........450.........460.........470.........480.........490
Sequence MFEECITKSIMNYAYLWLLIFGALGASSAVIVFWYPGLQLPEKSHFQLFVSKHPFEVYSSLKQQFWFEKP
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Known secondary structure (DSSP) S
TSS




SS
TT

B
TTSSSTTSSTT

 .........500.........510.........520.........530.........540.........550.........560
Sequence YNFKMHMHFVWGVQAVDDGDYTNPNSYGHLHYDNNFNVSSRPAQLWILDFCQSVRQQPFYKELPNCFIEN
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Known secondary structure (DSSP)



SB




S
TTSTT





B
TT

TTSTTSTT


SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence LIDYMKRRCIPCCDAQFPFEPHIFEYCLPQSISNMYDTTFFRPGVAGPKFAEAFTPLLVKALVIEFESNV
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Known secondary structure (DSSP) S




TT

SS

SS




S






 .........640.........650.........660.........670.........680.........690.........700
Sequence AYSTIYANIRQFYESVEHWFQMQLKTAPPELQGGWFTSDLKFYNVQDTLSHDTFVAICLAMAASLAVLLC
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Known secondary structure (DSSP)

SSTTS
TTSTT
SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence FTVNILISIYAVLTVSLSIFNTVAVLILLGWQLNILESIAVSTAIGLAVDFSLHYGIHYRMSPVKERLAA
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Known secondary structure (DSSP) S

T



T
SS
S
 .........780.........790.........800.........810.........820.........830.........840
Sequence TQFVLSRIIGPTVMAATTTGLAGGIMMASNILPYIQIGVFLVVVMIVSWFYATFFLMSLLRVAGPQHGFL
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Known secondary structure (DSSP) TSSSB


SSTT
 ..
Sequence EL
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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