Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6qp1B_

Fold library idPDB HeaderMoleculeTitle
c6qp1B_1.42PDB header: lyaseChain: B: PDB Molecule: aminotransferase;


Added to library: Sat Mar 7 09:21:35 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GGGFAVNYNFDEIIDRRYTNAMNVEGYKGYLFGDADTSDLKDNDELIRMWVADMDFGTPEVVLNAIRERL
Predicted secondary structure















































SS confidence





































































Known secondary structure (DSSP)

S
SS


TT




TTTT

TTS

TTS
SS




SS

SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence NKKILGYTNVFGSEYYEAFVSWTKKRYGFTFSQEHLVFSHGIVAGLIELVGYICDKDDKALIVTPSYGPF
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) TT




B


SS




GGGSS

TT
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence KMACDKNHISTVYSPLINHHGYYEIDFDDVRKKVETENIKLCIFANPHNPTGRVWSEEELATLGQIMKEN
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) TT

TT

S
SS
TTT




 .........220.........230.........240.........250.........260.........270.........280
Sequence DVWLISDEIHCDIKRSGQSHIPFAKAVPDYDKIITTMSQSKAFNIAGLMFSNIIIQNESLLKTWNTHHFG
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) T

TTTT
B
TT




STT
TT
ST
GGG







 .........290.........300.........310.........320.........330.........340.........350
Sequence TENPLSVVATQAAYEKGEGWLQAMNHYLDDNFNYLADFLEKELPHAEFKIPEATYLAWVDLSYYIKESMA
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)
B


TTS


SBSS
TTT



 .........360.........370.........380.........390........
Sequence KFFIKNAGVIIEGAEQFVHNAEGHIRINIAVPREVMKKGLQKIKAALV
Predicted secondary structure














SS confidence















































Known secondary structure (DSSP) S
GGGSSSS
TT

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D