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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6lcrB_

Fold library idPDB HeaderMoleculeTitle
c6lcrB_3.40PDB header: lipid transportChain: B: PDB Molecule: cdc50;


Added to library: Sat May 2 08:26:13 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence APKNRPPNTAFRQQRMRAWQCVLTPKLIVTVFSILAAIYLGFGAWLTYLAHTVRDLKIDYTDCLTSAPKD
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Known secondary structure (DSSP)








TTTTT









TTTSTT


TTS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DFETIPQNHITAHFSAKDSTFDPYKAQWKTTEREVQVANYTDNRQFCIVRFNIPEDLQPTISFFYYLENF
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Known secondary structure (DSSP) S


TTT




S
SS
TT



SSSS


S
B
S
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence YQNHRRYVNSFNAKQLLGDAVDGKTINDSTCDPITHDPKGTGKIVYPCGLVANSIFNDTFSSPLALAVRN
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Known secondary structure (DSSP)



S
B
TT



TTSS

SSSS
SSSS



TT
BSTTTT









SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SSDSSRPYNMTTKGIAWPGLKDLYGKTSYSLDQIVPPPNWERRYKYGYQENNPPPDLKTDELFQNWMMLA
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Known secondary structure (DSSP) SS
S

B


B
SS
S
TTGGGT




S
SSS



GGGTTT
TT
S
SSS



TTT
TTTTTTSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence AAPNFYKLYQKNDTHPMLAGQYEIEIESNFDVTVYKGRKAFVITTLSTMGSRNIWPGIIFLIVGGICLVL
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Known secondary structure (DSSP) SSSS
S

B
S

S

GGGT


SS
S

 .........360.........370......
Sequence DIYFILSFFIWRPRKLGDPSYLSWNQ
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Known secondary structure (DSSP) S



TT
TTSSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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