Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ihdA_

Fold library idPDB HeaderMoleculeTitle
c6ihdA_2.30PDB header: oxidoreductaseChain: A: PDB Molecule: malate dehydrogenase;


Added to library: Sat Feb 9 08:25:24 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AKVGFIGAGKIGQTIAYSALVSGAVDEAVIYDIIPELPDKFEHELRHAFATKGIKANVLGTNSLDDVSGM
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)


STT

S
SSTTT


S
GGG

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DIVVISAGKPRRDLFVDNAKIMIDLAQKLPSKNPGAIYLMVANPVDMMASVFMKYSKQFTISAGDQVETM
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) S






STT

SSS
S

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RMRSFIAKKLKIPVTSVDGFVGGEHGEDAVVLWSTVKIKGKPVDEFNINKDEVSDYVKKIPGEIIRVIGG
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) TTS
GGG

SSGGG
GGG
TTGGGS



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence TTWGPGTIIADIIKSIAFSENRVMSIATPKEYEKEIIHVSAPTVVGSSIGPSLESLLDEKDRWHLNSAMK
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)

T

TTSSS
GGGS
 .........290.........
Sequence DFYEAYKENLKQLEQATKA
Predicted secondary structure

SS confidence


















Known secondary structure (DSSP)





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D