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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6fvjB_

Fold library idPDB HeaderMoleculeTitle
c6fvjB_2.60PDB header: hydrolaseChain: B: PDB Molecule: thioesterase;


Added to library: Sat Oct 27 08:49:20 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AAPTLYIFPHAGGTAKDYVAFSREFSADVKRIAVQYPGLESIPTLADEIFAMMKPSARIDDPVAFFGHSM
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Known secondary structure (DSSP)




TT

GGGGTS
TTS







GGGS
TTST
 .........80.........90.........100.........110.........120.........130.........140
Sequence GGMLAFEVALRYQSAGHRVLAFFVSACSAPGHIRYKQLQDLSDREMLDLFTRMFVGALPTLRAVRAIAGY
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Known secondary structure (DSSP) TT
S




SS

TT


SSTT


GGGT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SCPPETKLSCPIYAFIGDKDWIATQDDMDPWRDRTTEEFSIRVFPGDHFYLNDNLPELVSDIEDKTLQWH
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Known secondary structure (DSSP)


TT

BSS
TT
SSS
GGGGGGBSS
SSSTTGGGTST
 ..
Sequence DR
Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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