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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6fknC_

Fold library idPDB HeaderMoleculeTitle
c6fknC_4.80PDB header: signaling proteinChain: C: PDB Molecule: plexin a, isoform a;


Added to library: Sat Feb 9 08:19:46 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NSTITNVAAFDTKLNHLLVDTITGRVFVGGVNRLYQLSPDLELSETVKTGPQNDSVECSILDCPLNAVRS
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Known secondary structure (DSSP)

S
SS

TTT

TT
TT





TT

SS


TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence PTDNYNKVLLIDRATSRLIACGSLFQGTCTVRNLQNVSIIEHEVPDAVVANDANSSTVAFIAPGPPQHPV
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Known secondary structure (DSSP)


TTTTS
SS
TT





S

SSSS
SSSSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TNVMYVGVTYTNNSPYRSEIPAVASRSLEKTKMFQIASSAVTTGTRTFINSYARETYFVNYVYGFSSERF
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Known secondary structure (DSSP)



S
GGGGGS
S

STTTTSBSSB
SS
BS


TTTTTT


SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SYFLTTQLKHSHHSSPKEYITKLVRICQEDSNYYSYTEIPVECISDAQGGTKFNLVQAGFLGKPSSDLAQ
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Known secondary structure (DSSP) S
SSTTS


SS
SS
TT

TTSS




 .........290.........300.........310.........320.........330.........340.........350
Sequence SLGISIQDDVLFAVFSKGEGNTPTNNSALCIYSLKSIRRKFMQNIKSCFNGSGMRGLDFISPSMPCVLTK
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Known secondary structure (DSSP) T

TTS
TTBT
SB


TTTS


B

B

 .........360.........370.........380.........390.........400.........410.........420
Sequence LQTIGEDFCGLDVNSPLGGETPITSVPVAMFNTKLTSVAATSTSGYTVVFVGTSDGFLKKVVIESSSIAN
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Known secondary structure (DSSP)




TT



STT
S

S


SSS

SSSSTTS
SSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence EYASFAVDLGSEINRDMQFDNQNLYIYVMSKTKVSKVKVFDCSDYKTCGDCLGARDPYCGWCSLENKCSP
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Known secondary structure (DSSP) SSTTS


S


TTSS
SSS


TT

STT
TT
SSSS

 .........500.........510..
Sequence RSNCQDDANDPLYWVSYKTGKC
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Known secondary structure (DSSP) GGGS
TTSSSGGG
TTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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