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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6fe8D_

Fold library idPDB HeaderMoleculeTitle
c6fe8D_3.70PDB header: dna binding proteinChain: D: PDB Molecule: centromere dna-binding protein complex cbf3 subunit c;


Added to library: Sat Aug 4 08:29:10 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FNPVRFLELPIDIRKEVYFHLDGNFCGLEYAFWLRYDCLVLDCFKVNHLYDGTLIDALEWTYLDNELRLA
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Known secondary structure (DSSP)

TTS
T
SS
S




TTTTTT
TS
S


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YFNKASMLEVWYTFKEYKKWVIDSVANVSNIQFNIDNLTPQLVDKCLSILEQKDLFATIGEVQFGSISVI
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Known secondary structure (DSSP)
TTS










STTS
SS
S
S




 .........150.........160.........170.........180.........190.........200.........210
Sequence RTIRSMESMKSLRKITVRGEKLYELLINFHGFRDNPGKTISYIVKRRINEIRLSRMNQISRTGLADFTRW
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Known secondary structure (DSSP) TTS

S


STSSS


S
TTTS

SSTTTS


S
SBSSTTS

B

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence DNLQKLVLSRVAYIDLNSIVFPKNFKSLTMKRVSKIKWWNIEENILKELKVDKRTFKSLYIKEDDSKFTK
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Known secondary structure (DSSP)




S
SB
BTTT
B

TT


S

SBB

ST

TT

S
SSSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FFNLRHTRIKELDKSEINQITYLRCQAIVWLSFRTLNHIKLQNVSEVFNNIIVPRALFDSKRVEIYRCEK
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Known secondary structure (DSSP) TTT
SS

STTS
TT

S






B
S
GGGTTTT
S
S
SS
 .........360.
Sequence ISQVLVIGSRS
Predicted secondary structure

SS confidence










Known secondary structure (DSSP)

S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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