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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6f2sB_

Fold library idPDB HeaderMoleculeTitle
c6f2sB_3.30PDB header: virusChain: B: PDB Molecule: capsid protein;


Added to library: Sat Jun 30 08:46:06 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PDVPKGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGNGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNH
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Known secondary structure (DSSP)

S
TT
SS
S



BSSSTTSBSSS

TTTTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TNTVMFYLVRDRRPFGTAMDFGQVFNMYDNEPSTATIKNDLRDRYQVLRKFTSTVTGGQYASKEQALVKK
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Known secondary structure (DSSP)

SS

SS



GGG
GGG

STTTTT



SSS
B
 .........150.........160.........170.........180.........190.....
Sequence FMKINNYVVYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN
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Known secondary structure (DSSP)
SS
SS
GGG

BSSSSS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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