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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6cd2B_

Fold library idPDB HeaderMoleculeTitle
c6cd2B_3.70PDB header: membrane protein/chaperoneChain: B: PDB Molecule: papgii adhesin protein;


Added to library: Sat Oct 6 08:31:33 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence WNNIVFYSLGDVNSYQGGNVVITQRPQFITSWRPGIATVTWNQCNGPEFADGFWAYYREYIAWVVFPKKV
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Known secondary structure (DSSP)




SSS






S
S
TTS
BB

BS
 .........80.........90.........100.........110.........120.........130.........140
Sequence MTQNGYPLFIEVHNKGSWSEENTGDNDSYFFLKGYKWDERAFDAGNLCQKPGEITRLTEKFDDIIFKVAL
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TTS


S


SS
SSB

S

B


S


TT







 .........150.........160.........170.........180.........190.........200.........210
Sequence PADLPLGDYSVKIPYTSGMQRHFASYLGARFKIPYNVAKTLPRENEMLFLFKNIGGCRPSAQSLEIKHGD
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Known secondary structure (DSSP)
TT

SSSSS





S








S







 .........220.........230.........240.........250.........260.........270.........280
Sequence LSINSANNHYAAQTLSVSCDVPANIRFMLLRNTTPTYSHGKKFSVGLGHGWDSIVSVNGVDTGETTMRWY
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Known secondary structure (DSSP)

TTS
SS

SS
SS

SS

SSS


SSSSS
TTSS
 .........290.........300.........310......
Sequence KAGTQNLTIGSRLYGESSKIQPGVLSGSATLLMILP
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Known secondary structure (DSSP) SSS


TTT


S







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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