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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6bl5A_

Fold library idPDB HeaderMoleculeTitle
c6bl5A_1.69PDB header: viral proteinChain: A: PDB Molecule: head decoration protein;


Added to library: Sat Feb 24 08:29:10 2018
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence RVPRLHAYGVFALPFPMDPDVEWGNWFAGPHPKAFLVSVHPSGPKAGHVYPTDLSDPDSVANVIGMVLDG
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Known secondary structure (DSSP)




GGG

B
TTS
GGGG

SSS

B

SSTTTT


TT
T
S
 .........80.........90.........100.........110.........120.........
Sequence HDYEADHNVTVTLRAAVPIEYVQQGIEAPPLQPDPAVLNAAPQLKLKVIKGHYFFDYTR
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Known secondary structure (DSSP)

TTT
SGGGB

SSSS
TTS

T
TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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