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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6b4cH_

Fold library idPDB HeaderMoleculeTitle
c6b4cH_2.80PDB header: antiviral proteinChain: H: PDB Molecule: viperin;


Added to library: Sat Jul 28 08:31:15 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GQVPVSVNYHFSRKCTTSHVEKPENAKRGLTLLKQAGMKKINFAGGEPFLYPKFLGEMIDFCKETLQLES
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Known secondary structure (DSSP)



S
S









T

SS
GGGSTTS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VSIVTNGSLVKEQFLQKHGRNIDILAVSCDSFNEATNIKIGRGSGDNVQKLYEIGSWCQKYDIKFKLNTV
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Known secondary structure (DSSP)
STT

GGG
S


SST

SS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VNKFNHLEDMNDHLNALQPFRWKCFQVLIVTLRNAHSLTISDDEFDRFCERHSSQTCLVPEPNRLMAKSY
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Known secondary structure (DSSP)
TTTTT




S


TTGGGT


TTTT
TT
GGG




 .........220.........230.........240.........250.........
Sequence LILDEYMRFLDRNGQQPSKSILEVGVQQALQAVFWDEEAFVERGGIYDW
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Known secondary structure (DSSP)

TTSBB

TTS
S


B
TT

GGG



TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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