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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6aziA_

Fold library idPDB HeaderMoleculeTitle
c6aziA_1.75PDB header: hydrolaseChain: A: PDB Molecule: d-alanyl-d-alanine endopeptidase;


Added to library: Sat Oct 7 08:21:55 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QPQIASGSAXIVDLNTNKVIYASHPDLVRPIAITKLXTAXVVLDAHLPLDEKLKVDISHTPEXKGVYSRV
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Known secondary structure (DSSP)



SSSTTTTSTT




TT

TT



TT
GGGTT


SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RLNSEISRKNXLLLALXSSENRAAASLAHHYPGGYDAFIRAXNAKAKALGXNNTRFVEPTGLSIHNVSTA
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Known secondary structure (DSSP)
TT


TSSTT
TT
TT
B
SSSSS
STT

 .........150.........160.........170.........180.........190.........200.........210
Sequence RDLTKLLIASKQYPLIGQLSTTREEXATFANPAYTLPFRNTNHLVYRENWNIQLTKTGFTNAAGHCLVXR
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Known secondary structure (DSSP) TT
T

BTTT
S
GGGG
TT

TTT
 .........220.........230.........240.........250.
Sequence TVFNGKPVALVVXDAFGKYTHFADASRLRTWIETGKVQPVP
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Known secondary structure (DSSP) TTSSTT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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