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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5yqiA_

Fold library idPDB HeaderMoleculeTitle
c5yqiA_1.60PDB header: transport proteinChain: A: PDB Molecule: membrane-anchored lipid-binding protein ysp2;


Added to library: Sat Feb 3 08:20:31 2018
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence AMDNDHLVIEANINAPLGKVVNLLYGEDVSYYERILKAQKNFEISPIPNNFLTKKIRDYAYTKPLIGPSK
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Known secondary structure (DSSP)

SGGGSS
SS
TTT
BS




S
S



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TKCLITDTLEHYDLEDYVKVLSITKNPDVPSGNIFSVKTVFLFSWDKNNSTKLTVYNSVDWTGKSWIKSM
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Known secondary structure (DSSP) TTT
TTSTTTTSTTTSS

TT
 .........150.........160......
Sequence IEKGTFDGVADTTKIMISEIKKILSD
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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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