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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5y9dA_

Fold library idPDB HeaderMoleculeTitle
c5y9dA_2.50PDB header: oxidoreductaseChain: A: PDB Molecule: acyl-coenzyme a oxidase 1;


Added to library: Sat Jan 6 08:22:06 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TTNTFTDPPVEMAKERGKTQFTVRDVTNFLNGGEEETQIVEKIMSSIERDPVLSVTADYDCNLQQARKQT
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Known secondary structure (DSSP)


TTTT

S
TS
GGG

TTGGG

 .........80.........90.........100.........110.........120.........130.........140
Sequence MERVAALSPYLVTDTEKLSLWRAQLHGMVDMSTRTRLSIHNNLFIGSIRGSGTPEQFKYWVKKGAVAVKQ
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Known secondary structure (DSSP) TT

TT
TS
TTTTTTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FYGCFAMTELGHGSNLKGLETTATYDQDSDQFIINTPHIGATKWWIGGAAHTSTHCVCFAKLIVHGKDYG
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Known secondary structure (DSSP)





BSS
SS
GGG


TTTT

SGGG
TTTTTT
STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TRNFVVPLRNVHDHSLKVGVSIGDIGKKMGRDGVDNGWIQFTNVRIPRQNMLMRYAKVSDTGVVTKPALD
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Known secondary structure (DSSP)
B
TTT

B
TT



SS
TTS

SSGGGB

SSSB

TTS


B

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence QLTYGALIRGRVSMIADSFHVSKRFLTIALRYACVRRQFGTSGDTKETKIIDYPYHQRRLLPLLAYCYAM
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Known secondary structure (DSSP)
TTSTT
B
S


TTS


BGGGS
 .........360.........370.........380.........390.........400.........410.........420
Sequence KMGADEAQKTWIETTDRILALNPNDPAQKNDLEKAVTDTKELFAASAGMKAFTTWGCAKIIDECRQACGG
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Known secondary structure (DSSP)

TT
STTTTGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence HGYSGYNGFGQGYADWVVQCTWEGDNNVLCLSMGRGLVQSALQILAGKHVGASIQYVGDKSKISQNGQGT
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Known secondary structure (DSSP) GGGSGGGSGGGGTSSS
TT



GGGGGGGS

S



SS

 .........500.........510.........520.........530.........540.........550.........560
Sequence PREQLLSPEFLVEAFRTASRNNILRTTDKYQELVKTLNPDQAFEELSQQRFQCARIHTRQHLISSFYARI
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Known secondary structure (DSSP)
T
TTTS
T
 .........570.........580.........590.........600.........610.........620.........630
Sequence ATAKDDIKPHLLKLANLFALWSIEEDTGIFLRENILTPGDIDLINSLVDELCVAVRDQVIGLTDAFGLSD
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Known secondary structure (DSSP) TTS
TTTSTTSS
TTT


 .........640.........650.........660.........670.........680.......
Sequence FFINAPIGSYDGNVYEKYFAKVNQQNPATNPRPPYYESTLKPFLFREEEDDEICDLD
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Known secondary structure (DSSP)

GGG
TT

S

S

S
TTTTTTT












Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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