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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5umrA_

Fold library idPDB HeaderMoleculeTitle
c5umrA_1.50PDB header: transcriptionChain: A: PDB Molecule: fact complex subunit ssrp1;


Added to library: Sat Feb 3 08:16:39 2018
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence XAETLEFNDVYQEVKGSXNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGHGLKLLTKNGH
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Known secondary structure (DSSP)

STTSSTTT

GGG
SSSTTS
 .........80.........90.........100
Sequence VYKYDGFRESEFEKLSDFFKTHYRLELXEK
Predicted secondary structure










SS confidence





























Known secondary structure (DSSP)
GGGS





Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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