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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5tbzK_

Fold library idPDB HeaderMoleculeTitle
c5tbzK_7.00PDB header: transcription/rnaChain: K: PDB Molecule: transcription termination/antitermination protein nusg;


Added to library: Thu Feb 9 15:36:04 2017
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence RWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMVPTGYVLVQMVMNDASWHLVRSVPRVMGFIGGTS
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Known secondary structure (DSSP)


TTS

SSS


B








STTS
SS

S
SS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DRPAPISDKEVDAIMNRLQQKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELD
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Known secondary structure (DSSP) SS



TT





TT
B
SGGGTT

TTTTTT
 .......
Sequence FSQVEKA
Predicted secondary structure


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Known secondary structure (DSSP) TTT


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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