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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5t4yB_

Fold library idPDB HeaderMoleculeTitle
c5t4yB_3.10PDB header: transport proteinChain: B: PDB Molecule: susd homolog;


Added to library: Thu Feb 9 13:15:15 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence CDDFLDRQVPQGIVTGDQIASPEYVDNLVISAYAIWATGDDINSSFSLWNYDVRSDDCYKGGSGTEDGGV
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Known secondary structure (DSSP)

TTTSS


SS


TTTTTSGGGS

TTS
TT
GGGGTTSTTB

BSSSTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FNALEISKGINTTDWNINDIWKRLYQCITRANTALQSLDQMDEKTYPLKNQRIAEMRFLRGHAHFMLKQL
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Known secondary structure (DSSP) T
S

TT
TS
TTT
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FKKIVIVNDENMEPDAYNELSNTTYTNDEQWQKIADDFQFAYDNLPEVQIEKGRPAQAAAAAYLAKTYLY
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Known secondary structure (DSSP) SS





TT

GGGGGG

SSSS
S
S

SSTTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence KAYRQDGADNALTGINEEDLKQVVKYTDPLIMAKGGYGLETDYSMNFLPQYENGAESVWAIQYSINDGTY
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Known secondary structure (DSSP)

SSSSS


T
TTT



SSGGGGGSGGGTT
SS
S


SSSSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence NGNLNWGMGLTTPQILGCCDFHKPSQNLVNAFKTDSQGKPLFSTYDNENYEVATDNVDPRLFHTVGMPGF
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Known secondary structure (DSSP) S
S

GGGTT
S
GGGSS

BS
B
TT
TTS
B
TTTTTSS


TTTS
GGGGGT
TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence PYKYNEGYIIQKNDDWSRSKGLYGYYVSLKENVDPDCDCLKKGSYWASSLNHIVIRYADVLLMRAEALIQ
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Known secondary structure (DSSP) TT

SSTTT
TTTTTT
S

SS


TT
TTSSS



 .........430.........440.........450.........460.........470.........480.........490
Sequence LNDGRITDAISLINEVRSRAAGSTMLIFNYKEDYGVNFKVTPYDLKAYAQDEAMKMLKWERRVEFGMESS
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Known secondary structure (DSSP)
SS
T

TTTTTT







SS


TTTSS
 .........500.........510.........520.........530.........540.........550...
Sequence RFFDLVRWGEAKDVINAYYVTEASRCSIYKNAGFTENKNEYLPVPFEQISASNGNYTQNFGWH
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Known secondary structure (DSSP) TT
TT
GGGTT



TTTSSS



TT




TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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