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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5oflA_

Fold library idPDB HeaderMoleculeTitle
c5oflA_1.87PDB header: hydrolaseChain: A: PDB Molecule: glycoside hydrolase family 48;


Added to library: Sat Oct 7 08:20:46 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DKMPDWNIPSLYESYKNDFRIGVAIPAKCLSNDTDRRMVLKHFNSITAENEMKPESLLAGQTSTGLNYRF
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Known secondary structure (DSSP)




TTS

TTTT

GGGGG

SSSTTSTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence STADTFVDFANTNNIGIRGHTLVWHSQTPDWFFKDSSGQRLTKDALLARLKQYIYDVVGRYKGKVYAWDV
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Known secondary structure (DSSP) TT

GGGS
GGGGB
TTS
B

TTTT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence VNQAIDENQSDGYRRSTWYEICGPEYIEKAFIWAHEADPNAKLFYNDYNTEISKKRDFIYNMVKNLKSKG
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Known secondary structure (DSSP) S
B
TTSTTSB


TT
TTSS
TTSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IPIHGIGMQCHINVNWPSVSEIENSIKLFSSIPGIEIHITQLDMSLYNYGSSENYSTPPQDLLQKQAQKY
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Known secondary structure (DSSP)





SSSS
TTSTT
SS
TT




SS

 .........290.........300.........310.........320.........330.........
Sequence KELFTMLKKYTNVVKCVTFWGLKDDYSWLRSFNGKNDWPLLLFEDYSAKPAYWAVIEAS
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Known secondary structure (DSSP) GGGTTTS
SSGGG
TS



SSB
TTS
B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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