Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5oe9C_

Fold library idPDB HeaderMoleculeTitle
c5oe9C_2.40PDB header: viral proteinChain: C: PDB Molecule: large subunit terminase;


Added to library: Sat Oct 14 08:21:17 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PFSKKQLKVLTWWRKASPVSDKDGIICDGSIRAGKTIVMSFSYVMWAMDTFNEQNFGMAGKTIGALRRNV
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)


TTSTTSTTTTSS
TT
S
SS
SST
 .........80.........90.........100.........110.........120.........130.........140
Sequence ITPLKRMLKSRGYRVKDHRADNYLTITFKGKTNYFYLFGGKDESSQDLIQGITLAGMFFDEVALMPESFV
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) TT
TTTTTTSS



STGGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NQATARCSVDGAKLWFNCNPAGPYHWFKVEYLDKLDEKNLLHLHFTMDDNLSLSKQVKERYQRMYKGVFY
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) T

STT




TTSTGGGT
GGG
TTS
TT

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence QRYILGLWVLAEGIIYDMFDQDEHVVPTVPRPYEKYYVSCDYGTQNPTTFGLWGLYNGVWYKVKEYHYDG
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) TT






SBTTTT

TTTS






S

SSS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence RKENKQKTDQEYYEDLMKFIEDIEKHKFKGVIVDPSAASFIALLRQKGIKVIKAKNDVLDGIRNVATALN
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) T



TTTS
TTT
TT
TT





 .........360.........370.........380.........390.........400.........410.....
Sequence KKMILYNDCCKETFREYSSYVWDEKAAERGEDKPVKQNDHQLDADRYFVNTILFGNKLRAVPSLY
Predicted secondary structure








































SS confidence
































































Known secondary structure (DSSP) TTSTT
TT
BB
TT


B
SSS
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D