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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5nrkA_

Fold library idPDB HeaderMoleculeTitle
c5nrkA_1.45PDB header: protein bindingChain: A: PDB Molecule: endoglucanase;


Added to library: Sat Feb 3 08:18:09 2018
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence MQTGFNLSIDTVEGNPGSSVVVPVKLSGISKNGISTADFTVTYDATKLEYISGDAGSIVTNPGVNFGINK
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Known secondary structure (DSSP)


S


TTSS

TT
B

TTT
TT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ESDGKLKVLFLDYTMSTGYISTDGVFANLNFNIKSSAAIGSKAEVSISGTPTFGDSTLTPVVAKVTNGAV
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Known secondary structure (DSSP) TT
TTSSS

B
S

TT

TT

TTS
B



 ...
Sequence NLE
Predicted secondary structure
SS confidence


Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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