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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5lk1A_

Fold library idPDB HeaderMoleculeTitle
c5lk1A_1.70PDB header: viral proteinChain: A: PDB Molecule: envelopment polyprotein;


Added to library: Thu Feb 9 14:33:58 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TPVWNDNAHGVGSVPMHTDLELDFSLTSSSKYTYRRKLTNPLEEAQSIDLHIEIEEQTIGVDVHALGHWF
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Known secondary structure (DSSP)






S

GGG

TT



TTT
S




 .........80.........90.........100.........110.........120.........130.........140
Sequence DGRLNLKTSFHCYGACTKYEYPWHTAKCHYERDYQYETSHGCNPSDCPGVGTGCTACGLYLDQLKPVGSA
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Known secondary structure (DSSP) SSS
STTS

GGGS
SST


TTTSBTT


SS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence YKIITIRYSRRVCVQFGEENLCKIIDMNDCFVSRHVKVCIIGTVSKFSQGDTLLFFGPLEGGGLIFKHWC
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Known secondary structure (DSSP) TTTT

SS



S

TT

SS
SSSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence TSTCQFGDPGDIMSPRDKGFLCPEFPGSFRKKCNFATTPICEYDGNMVSGYKKVMATIDSFQSFNTSTMH
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Known secondary structure (DSSP) SS

BTTSTT
SSSSS

B

B

S


TBS


S

S
TTGGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence FTDERIEWKDPDGMLRDHINILVTKDIDFDNLGENPCKIGLQTSSIEGAWGSGVGFTLTCLVSLTECPTF
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Known secondary structure (DSSP) TT


TT

SSS

TT



BSS
SS
 .........360.........370.........380.........390.........400.........410
Sequence LTSIKACDKAICYGAESVTLTRGQNTVKVSGKGGHSGSTFRCCHGEDCSQIGLHAAAPHL
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Known secondary structure (DSSP) TT



TT

BTT
S

B

B
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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