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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5jddA_

Fold library idPDB HeaderMoleculeTitle
c5jddA_1.53PDB header: structural proteinChain: A: PDB Molecule: titin;


Added to library: Thu Feb 9 13:43:43 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MVKIIKKPKDVTALENATVAFEVSVSHDTVPVKWFHKSVEIKPSDKHRLVSERKVHKLMLQNISPSDAGE
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Known secondary structure (DSSP)






TT

SSTT


TT



SSTT
S

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence YTAVVGQLECKAKLFVETLHITKTMKNIEVPETKTASFECEVSHFNVPSMWLKNGVEIEMSEKFKIVVQG
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Known secondary structure (DSSP) TT






TTS
SSTT



TT


SSST
 .........150.........160.........170.........180.........190.........200.........210
Sequence KLHQLIIMNTSTEDSAEYTFVCGNDQVSATLTVTPIMITSMLKDINAEEKDTITFEVTVNYEGISYKWLK
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Known secondary structure (DSSP) T
S

GGG
TT






TT

SSTT


 .........220.........230.........240.........250.........260...
Sequence NGVEIKSTDKCQMRTKKLTHSLNIRNVHFGDAADYTFVAGKATSTATLYVVEA
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Known secondary structure (DSSP) TT



SSTT
S

GGG
TT


Download:PDB structure FASTA sequence

Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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