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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5iheB_

Fold library idPDB HeaderMoleculeTitle
c5iheB_2.50PDB header: transferaseChain: B: PDB Molecule: dna polymerase ii small subunit;


Added to library: Thu Feb 9 18:52:25 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VVLDKYGYPILYYSKYEDVVIEWNPSVTPVQIEKNYEVKFDVRQVKLRPPKVEAYASLFKSRLSKLKRIL
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Known secondary structure (DSSP)

TT



STT





TTS








TT









TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RENPEISNVVDIGKLNYVSGDEEVTIIGLVNSKRETNRGLIFEVEDKTGIVKVFLPKDSEDYREAFKVLP
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Known secondary structure (DSSP) TTSTT

SB

GGGGGGS
TTS

SS
SS
TT
TT

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence DAVVAFKGFYSKKGIFFANKFYLPDVPLYRKQKPPLEEKVYAILISDIHVGSREFCEKAFLKFLEWLNGH
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Known secondary structure (DSSP) T

TTS




S







SS





BTBTTB
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VESKEEEEIVSRVKYLIIAGDVVDGIGIYPGQYSDLVIPDIFDQYEALANLLANVPEHITMFIGPGNHDA
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Known secondary structure (DSSP)
SSTS

B

SSSSTTGGGGBSS
BTTS
TTS

SSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ARPAIPQPEFYKEYAKPIYKLKNAIIISNPAVIRLHGRDFLIAHGRGIEDVVSFVPGKPGLPMVELLKMR
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Known secondary structure (DSSP) S
SSBSB
S

T
TT

BSTT


S


TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence HLAPTFGGKVPIAPDPEDLLVIEEVPDLVQMGHVHVYDAVVYRGVQLVNSATWQAQTEFQKMVNIVPTPA
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Known secondary structure (DSSP) BS



SSSS
B


SS
TTB

S

S
SS

TT
BSB


TT



BT
 .........430.........440..
Sequence KVPVVDVESARVVKVLDFSGWC
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Known secondary structure (DSSP) TTTT
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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