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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5cnzA_

Fold library idPDB HeaderMoleculeTitle
c5cnzA_1.74PDB header: peptide binding protein/immune systemChain: A: PDB Molecule: mhc class i antigen;


Added to library: Thu Feb 9 14:04:38 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GTHSLKYVYTGVSRGIDFPEFTAVGMVDDGQFMYFDSNSMKAVPKTEWIRQNEGADYWDRQTQVLIGAHQ
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Known secondary structure (DSSP)

S
SSS
STTTTTT


STT

 .........80.........90.........100.........110.........120.........130.........140
Sequence VFKDSIQIVMERFNQSKGVHTWQNMYGCELNDDGTTQGFYQYAYDGEDFVSLDKNTLTWTAANPQAVITK
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Known secondary structure (DSSP) TT

SS

TTS
TTTTTTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence HKWEALAVAEQNKGYLENTCIEWLKKYVAYGKDTLERKVSPQVSLLQKDPSSPVTCHATGFYPSGVTITW
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Known secondary structure (DSSP) TTTTT

B

SSTTS
BSS

 .........220.........230.........240.........250.........260.........270.....
Sequence QKNGQDHDEDVDLGELLPNEDGSFQRMSTLNVGPDEWKNNRFSCVVEHQDKTIRKTEDDIITNFD
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Known secondary structure (DSSP) TT

TT



TTS



S
TTGGG
B
S


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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