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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5azmA_

Fold library idPDB HeaderMoleculeTitle
c5azmA_1.75PDB header: hydrolaseChain: A: PDB Molecule: n-acetylglucosaminidase;


Added to library: Thu Feb 9 15:03:57 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ASKTNYGVSLNEYIKLQQRNNPSNYSYSEFEKYINPAKATNKLQFLRIDKFRSVNVSGLSSRLSNKGVLT
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Known secondary structure (DSSP)


S

SS



GGG
S
GGGGB

SS


B


S
GGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GQGQAFVNAAKAFNIDPIYLVAQCLHETGNGTSKLAKGVTITEIADESKPIYNGNGQLVGYHMIKLSKPV
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Known secondary structure (DSSP) T
TT

TTTTS

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TVYNLFGIGAKDNSSVFPNRALILGTTYAYNRGWTSIENAIKGAAEFVSLNYVHSSRYSQNTLYKMRYNQ
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Known secondary structure (DSSP)

SS
TT



BTTBTTTT

STTT
TTT


SS
S
 .........220.........230.........240.........250....
Sequence NVSNIWHQYATTPWYASSIADIMRSYQDLYLENNFTFDVPVFAG
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Known secondary structure (DSSP) SGGGTT

S
S
TTTTGGGBS




B



Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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