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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c4zmtF_ | 2.70 | PDB header: cell adhesion | Chain: F: PDB Molecule: cadherin-3; |
Added to library: Thu Feb 9 18:17:21 2017 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | M | D | W | V | V | A | P | I | S | V | P | E | N | G | K | G | P | F | P | Q | R | L | N | Q | L | K | S | N | D | T | K | I | F | Y | S | I | T | G | P | G | A | D | S | P | P | E | G | V | F | A | V | E | K | E | T | G | W | L | L | L | N | K | P | L | D | R | E | E | I | A |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | ![]() | ![]() | ![]() | ![]() | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | B | T | T | T | B | S | S | T | T | S | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | ![]() | S | T | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | K | Y | E | L | F | G | H | A | V | S | E | N | G | A | S | V | E | D | P | M | N | I | S | I | I | V | T | D | Q | N | D | H | K | P | K | F | T | Q | D | T | F | R | M | Q | V | T | A | T | D | E | D | D | A | I | Y | T | Y | N | G | V | V | A | Y | S | I | H | L | M | F | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | B | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | B | ![]() | ![]() | S | S | S | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
Sequence | I | H | R | S | T | G | T | I | S | V | Y | T | L | T | I | Q | A | T | D | M | D | G | D | G | S | T | T | T | A | V | A | V | V | |||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | G | G | G | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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