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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c4ytlB_ | PDB header: transcription | Chain: B: PDB Molecule: transcription elongation factor spt5; | PDBTitle: structure of the kow2-kow3 domain of transcription elongation factor2 spt5. |
Added to library: Sat Aug 15 08:27:22 2015 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | F | Q | P | G | D | R | I | E | V | L | N | G | E | Q | R | G | S | K | G | I | V | T | R | T | T | K | D | I | A | T | I | K | L | N | G | F | T | T | P | L | E | F | P | I | S | T | L | R | K | I | F | E | P | G | D | H | V | T | V | I | N | G | E | H | Q | G | D | A | G | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | ![]() | ![]() | S | S | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | ![]() | G | G | G | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | S | S | T | T | T | T | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
Sequence | V | L | X | V | E | Q | G | Q | V | T | F | X | S | T | Q | T | S | R | E | V | T | I | T | A | N | N | L | S | K | |||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | G | G | G | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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