HHsearch 1.5 NAME c4ytlB_ FAM FILE c4ytlB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4ytlB_.a3m DATE Sat Aug 15 08:27:22 2015 LENG 99 match states, 99 columns in multiple alignment FILT 60 out of 64 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.0 EVD 0.4325 0.1668 SEQ >ss_dssp CCTTCEEEECSSTTTTCEEEEEEECSSEEEEEETTCCSCEEEEGGGEEECCCTTCEEEECSSTTTTCEEEEEEEETTEEEEEETTTSCEEEEEGGGEEC >sa_dssp CEDECEACBDDEECCECDBDADEDEDEDABADAEECEDECEBDCEBACBCBEEDBEBDADEDEDEDBCBDBDDDEEBDABADAEEDEEEBDBDBDCACE >ss_pred CCCCCEEEEECCCCCCCEEEEEEECCCEEEEECCCCCCEEEECHHHEEECCCCCCEEEEECCCCCCCCEEEEEEECCEEEEECCCCCCEEEEEHHHHCC >ss_conf 977769999538322539999994088899952888752995088608823489769997033488617999985999999658987789997457169 >Consensus FxxGDxVxVxxGelxxlxGxVxxvxxxxvxixxxxxxxxixxxxxxLrKxFxxGDhVkVixGxxxGetGlVvxvxxxxvxixsdxtxxEixVxxxdLxx >c4ytlB_ FQPGDRIEVLNGEQRGSKGIVTRTTKDIATIKLNGFTTPLEFPISTLRKIFEPGDHVTVINGEHQGDAGLVLXVEQGQVTFXSTQTSREVTITANNLSK >UniRef50_C4LVU5(372-470:774) Transcription initiation factor SPT5, putative n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4LVU5_ENTHI E=1e-10 s/c=0.69 id=18% cov=98% YKEGDLVIIINPD-EHVQGkktKIVHIDGDKIIVMGNELDTPITLSKEDVSIYFNVGDRVKVTDGMYANETGIIEAIKGDEVFVFTDKKKSSICVSQIDL -- >UniRef50_A2ED41(401-502:900) KOW motif family protein n=1 Tax=Trichomonas vaginalis RepID=A2ED41_TRIVA E=0.0003 s/c=0.45 id=30% cov=77% FNQGDIARILEpHEYQDVIVDVLGVQGNIIHVApratnevEKAQYDGIEFDIQSdlLEKYFHEGDRVKIIAGANRGKIGIVLGVD--------------- --------- >UniRef50_Q54K42(515-615:1131) Transcription initiation factor Spt5 n=1 Tax=Dictyostelium discoideum RepID=Q54K42_DICDI E=2e-27 s/c=1.22 id=30% cov=101% FAKGDTVKVIQGDLKNLMAIVESVEEDRVLILPidEQIKDLFAFKPYELQKYFKVGDHVKAIGGRYEGETGMVLRVDDLQVVLLSDLTMSEIKVKPQDLQ E >UniRef50_C4V9R4(266-357:566) Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4V9R4_NOSCE E=2e-10 s/c=0.72 id=26% cov=73% FDAGDKVKVIKGELIGTKGVVKSVTGPMTIIVAEGKN--FEIFSNFLDKYYNIGEEV-----CFNSENGIITNIKNNK--------------------- >UniRef50_B0DCJ5(9-95:276) Predicted protein n=2 Tax=Laccaria bicolor S238N-H82 RepID=B0DCJ5_LACBS E=7e-18 s/c=1.05 id=28% cov=89% FRLEDAVKIIEGDKKGLFGRISKIKGNEADVFLPENGLTSTLPLSSLRKNIKVGDAVRVTAGVHQGFIGWVVNKDN-------DKTGNEVGVSP----- >UniRef50_UPI000187EF42(368-462:998) hypothetical protein MPER_13106 n=2 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187EF42 E=2e-08 s/c=0.63 id=26% cov=83% FEEGEVVTVC--DVPGLIGAVISVDRElkscVVTLGSKNAGGEdhesnayaglLSVPMKKLEKVVKVGDYVSVVAGTNKGKEGLVTDKHGTDLHIFS--- ------------- >UniRef50_A7AM03(410-511:864) KOW motif family protein n=1 Tax=Babesia bovis RepID=A7AM03_BABBO E=9e-17 s/c=0.86 id=27% cov=101% FRLGEKIRVTRGELINVIGHIASMHNDEIEIQPEDESIPnFKIQPSCVMKYFQEGDNVRIIDGINRGESGLisIVDFEKKTAVVFSPQKSEQFKVKLDYL VK >UniRef50_Q4DTT9(430-532:720) Transcription initiation protein, putative n=4 Tax=Trypanosoma RepID=Q4DTT9_TRYCR E=3e-15 s/c=0.80 id=29% cov=95% ---GNTVRVVSGQLRETVGTIENIFLDTNTVslscPVPGRKEPIKVRVElaACVKHFALGTHVIVSSGERAGESGTVVNSSGDVVYIFSDraTASRELTV CASD--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * F 1 * * * * 263 * * 5158 * * * * * * * * * * * 2853 1 0 * * * * * * 4828 0 0 Q 2 3204 * 4970 5024 5160 * * * 3299 4112 2707 4311 * 2405 3276 4914 5750 3410 * * 2 0 * * * * * * 4861 0 0 P 3 4353 * * 4057 * 5914 * 5234 2321 3695 5882 * 1547 4352 5343 * 6018 3034 * * 3 53 4803 * 2585 263 * * 4855 1000 0 G 4 * * 5682 5433 * 88 * * 5933 * * * * * * * * * * * 4 0 * * * * * * 5088 0 0 D 5 * * 313 2870 * * * * * * * 4095 * * * * * * * * 5 0 * * * * * * 5088 0 0 R 6 4064 * * * * 5032 4740 4159 3415 5346 * 3785 4742 3635 2831 3668 2609 3401 * 5072 6 0 * * * * * * 5088 0 0 I 7 3981 * * * * * * 2934 * * * * * * * * * 312 * * 7 0 * * * * * * 5088 0 0 E 8 5072 * * 1780 * * * 3105 2154 5363 * * * * 2205 * 4455 4283 * * 8 0 * * * * * * 5088 0 0 V 9 5128 5072 * * * * * 1563 * * * * * * * * * 729 * * 9 0 * * * * * * 5088 0 0 L 10 5696 4028 4210 * 4539 * * 1708 6039 3240 5863 5001 * * 6084 6193 3258 3445 * 3035 10 36 * 5340 * * * * 5088 0 0 N 11 6024 * 4563 1796 * 4625 * 4557 2299 * * 3631 * 4093 2898 5145 4661 5217 * * 11 99 4580 5338 0 * * 0 5043 1128 1000 G 12 * * * * * 208 4550 * * * * * 4072 * 4972 * * * * * 12 0 * * * * 965 1036 5003 0 1565 E 13 * * 1271 988 * * * * * * * 5111 * 4254 * * * * * * 13 37 * 5316 * * * 0 5051 0 1000 Q 14 * * * * * * * * 5353 658 5536 * * 2412 * 4986 * 5295 * 3732 14 49 4899 * 0 * 941 1061 5017 1000 1564 R 15 4146 5667 * 3846 * * * 2923 1966 * * 5933 5307 3216 2668 * 4117 3559 * 5841 15 0 * * * * 0 * 5051 0 1000 G 16 5032 * 4616 5160 * 1326 3802 * 6084 * * 1542 * * * 5809 5363 * * 5072 16 25 5868 * 2000 415 * * 5088 1000 0 S 17 5128 * * * 5471 5032 * 4790 * 1116 3532 * * * * 6084 3447 2134 * * 17 0 * * * * * * 5088 0 0 K 18 6205 * * 4679 3603 * * 2663 3040 4228 4233 * * 3334 3301 5389 3420 3276 * 4109 18 0 * * * * * * 5088 0 0 G 19 3776 * * * * 174 * * * * * * * * * * * 4616 * * 19 36 5346 * 1585 585 * * 5088 1000 0 I 20 5340 * 4616 5021 * * 5831 3554 1934 * * * * 4564 3478 * 2677 2538 5384 4189 20 0 * * * * * * 5088 0 0 V 21 4984 * * * * * * 1442 * 5907 * * * * * 5868 5143 893 * * 21 29 5636 * 3000 193 * * 5088 1000 0 T 22 4457 * 4238 1849 * * * 3793 4575 3229 6039 * * * 6367 4680 2876 2318 * * 22 0 * * * * * * 5088 0 0 R 23 2988 * 3883 5072 * 4205 5346 * 3559 * * 2901 * * 4379 1635 3199 * * * 23 0 * * * * * * 5088 0 0 T 24 5317 * 5636 * * 5868 * 1754 * 4088 5006 * * * * * 3814 1059 * * 24 17 6392 * 1000 1000 * * 5088 1000 0 T 25 * * 2043 3042 4283 5363 4567 * 4219 * 5692 3036 * 4000 4195 2907 3782 * * * 25 0 * * * * * * 5088 0 0 K 26 4931 * 3089 2887 * 1235 * * 3877 4550 * 4881 5275 5977 5340 5580 4118 * * * 26 45 5021 * 1000 1000 * * 5088 1000 0 D 27 4646 * 1456 2953 * 4976 * 6392 * * * 2091 5289 * * 4653 3740 4383 * * 27 258 2611 * 1452 656 * * 5088 3194 0 I 28 * * * 3267 * * * 2294 4109 * 4307 4279 * 3646 4971 4551 2159 2700 * * 28 103 3865 * 1852 468 * * 5088 2148 0 A 29 3170 * 6072 * * * * 2328 * 3500 5663 5160 * * 4349 * 5289 1179 * 5471 29 0 * * * * * * 5088 0 0 T 30 6397 * 5433 4171 * * 3387 3983 4215 3301 6392 6162 * 6064 5693 5977 1360 3095 * 6300 30 14 6718 * 1000 1000 * * 5088 1000 0 I 31 * 4234 * * * * * 1700 * 2630 5153 * 2827 * * * * 1697 * * 31 199 3237 5471 1306 748 * * 5088 2772 0 K 32 4544 * 5017 3625 4206 5299 * 5525 2557 5173 4628 3792 3730 3715 2618 5247 5407 3848 * * 32 83 4165 * 1812 484 * 0 5062 2218 1000 L 33 4263 * * 5526 5525 5334 3278 4175 5357 2545 * * 2661 * * 3078 4891 2303 * 6288 33 42 5137 * 1000 1000 0 * 5062 1437 1000 N 34 * * 3224 2052 * * 5977 5244 2863 5580 6072 3701 3010 4512 4955 4537 3104 * * * 34 117 3687 * 2509 279 * * 5088 2190 0 G 35 4616 * 1983 2772 * 1905 5933 * 5363 5692 * 2988 4870 6315 * 5977 4499 * * * 35 126 4072 5389 1815 483 * * 5088 1990 0 F 36 5311 * 6081 5720 4446 2604 5027 3550 5272 1812 4407 4627 * 3980 3781 4902 5620 5241 * * 36 70 4396 * 1585 585 0 * 5087 1673 1147 T 37 4770 * 3357 4429 * 2398 4223 6257 2693 4792 5810 3453 5384 * 6064 3515 3433 5417 * 5597 37 146 4089 4730 1624 566 * * 5088 1939 0 T 38 5006 * 2331 2130 * 5258 * 4524 3480 3260 * 4636 * 2779 * * 4038 5000 * * 38 62 4566 * 2330 320 * 0 5020 1774 1503 P 39 5999 * 6224 2671 * 3983 * 4728 4606 4129 5489 5837 1746 4660 4152 * 2645 5555 * * 39 162 3237 * 2083 388 0 * 5020 2842 1503 L 40 * * * 5363 2600 * * 1349 * 2099 * * * * 5072 5433 * 2922 * * 40 41 5162 * 1735 515 * * 5088 1461 0 E 41 4284 * 2868 1713 * * * 6278 3263 4286 5689 * 4538 5663 5841 5331 2772 3891 * * 41 0 * * * * * * 5073 0 0 F 42 5144 * * * 1665 * * 3098 * 3404 5053 * * * * * 5564 1436 * 5369 42 0 * * * * * * 5073 0 0 P 43 5714 * 3443 * 5321 * * * 3573 3825 6372 3912 1395 3086 5185 3816 4856 * * * 43 0 * * * * * * 5073 0 0 I 44 2799 * * 4311 4728 5045 * 3804 4251 3668 4164 6504 3415 * 5704 2972 3354 3322 * 5053 44 44 * 5053 * * * * 5073 0 0 S 45 * * 3712 2854 * 5271 4832 * 2443 4859 * 3392 * 5048 2870 2302 * 6055 * 5263 45 76 4287 * 1000 1000 * 0 5015 1327 1000 T 46 4287 4995 2390 2559 5286 3634 4331 * 5306 4504 * 5658 * 3032 * 2654 5021 * * * 46 31 5545 * 1000 1000 0 * 5015 1000 1000 L 47 * 4307 * * * * * 5820 * 375 * * * * * * * 2639 * * 47 0 * * * * * * 5073 0 0 R 48 5014 3786 5321 3744 * * * 5841 4054 * 4962 * * 4111 1174 4529 4075 3583 * * 48 0 * * * * * * 5073 0 0 K 49 * * * * * * * 5365 114 * * * * * 4275 * * * * * 49 0 * * * * * * 5073 0 0 I 50 * 5301 4309 * 4465 * 2542 5046 5364 4614 * 3840 * 6227 3545 4330 * 3555 * 1698 50 0 * * * * * * 5073 0 0 F 51 * * * * 353 * * 4145 * 3745 * * * * * * * 4032 * 5321 51 0 * * * * * * 5073 0 0 E 52 4092 * 3960 3000 * * 4642 5695 1808 5879 * 3093 5917 3500 3421 4127 * 5841 * * 52 0 * * * * * * 5073 0 0 P 53 6113 * 4660 2453 * * 5408 2924 * 3630 4755 * 2700 6080 * * 4314 1882 * * 53 0 * * * * * * 5073 0 0 G 54 5145 * * * * 41 * * * * * * * * * * * * * * 54 0 * * * * * * 5073 0 0 D 55 4125 * 488 3868 * * * * * * * 5267 * 4302 * 4133 5185 * * * 55 0 * * * * * * 5073 0 0 H 56 5490 * * 3585 4901 * 983 * 6711 * * 3467 * * 3065 5564 4397 * * 3903 56 0 * * * * * * 5073 0 0 V 57 5160 5663 * * 5538 * * 4975 * * * * * * * * * 154 * * 57 88 * 4086 * * * * 5073 0 0 T 58 * * * * * * * 5110 977 * * * * 4162 1877 4127 4221 5392 * * 58 0 * * * * * 0 4990 0 1857 V 59 3895 5656 * 6189 * * * 2488 * * * * * * * * * 472 * * 59 0 * * * * * 0 4990 0 1857 I 60 * * * 5392 * * * 1362 * 2419 3810 * * 5109 * 5110 3911 2290 * * 60 0 * * * * * 0 4990 0 1857 N 61 2123 * 3309 4124 * 2498 4466 * 6580 5088 * 4221 * * 4244 2252 4889 * * * 61 32 5491 * 0 * * 0 4990 1000 1857 G 62 * * 4895 * * 49 * * * * * * * * * * * * * * 62 78 4249 * 0 * 0 * 5006 1566 1857 E 63 4069 5315 4715 3931 * * * 4327 2772 5682 4672 5237 5041 5003 2096 3921 3656 3484 * * 63 0 * * * * * * 5066 0 0 H 64 * * * * 3510 * 1677 * * * * 2437 * 5282 4692 4524 * * 5658 1800 64 16 6495 * 0 * * * 5066 1000 0 Q 65 2589 * 6278 1730 * 5003 * * 2638 6196 * 5315 5041 3664 3452 5081 5156 5031 * * 65 0 * * * * * * 5066 0 0 G 66 * * 2648 * * 431 * * * * * 3762 * * * 5315 * * * * 66 0 * * * * * * 5066 0 0 D 67 3991 * 2648 1321 4244 6178 4834 5365 2822 * * * * 5134 5086 * * 4266 * * 67 0 * * * * * * 5066 0 0 A 68 4838 * * 4198 * * * 3424 * 6236 * 4078 * * * 2479 1021 3782 * * 68 0 * * * * * * 5066 0 0 G 69 * * * * * 0 * * * * * * * * * * * * * * 69 0 * * * * * * 5066 0 0 L 70 * * * * * * * 3042 * 1289 2301 * * * * * 3197 4415 3460 5658 70 27 5727 * 1000 1000 * * 5066 1000 0 V 71 * * * * * * * 1745 * * * * * * * * * 511 * * 71 0 * * * * * * 5066 0 0 L 72 * * * 5358 * * * 4017 * 2435 * * * * * 4771 2862 850 * * 72 0 * * * * * * 5066 0 0 X 73 3249 * 4503 3517 * 4197 * * 2034 4722 5811 3129 * 5343 2295 3915 * * * * 73 0 * * * * * * 5061 0 0 V 74 * * * * 4181 6691 * 2170 3701 4322 * * * 5138 * 4300 5365 1051 * * 74 29 5658 * 1000 1000 * * 5066 1000 0 E 75 5086 * 1670 1750 * * 5319 * 3130 * * 3391 * 4886 5994 4621 * 6481 5431 * 75 140 3678 6125 2308 325 * * 5066 1961 0 Q 76 * * 1580 3174 * 1857 * * 4367 * * 3457 4308 3791 5927 * * * * * 76 37 * 5317 * * 0 * 4925 0 1000 G 77 * 5666 1590 5607 5840 4886 4432 * 4086 5153 * 2247 * 5117 * 2966 3729 * * * 77 56 4714 * 1549 603 * 0 4892 1663 1000 Q 78 * * 4551 4146 4692 * 5835 4637 4009 4277 5305 * * 4492 3234 3695 3029 2016 * 3882 78 0 * * * * * 0 4892 0 1000 V 79 2002 3656 * * * * * 3531 * 4151 * * * * 5878 * 4528 1096 * * 79 0 * * * * * 0 4857 0 1000 T 80 * 6167 * 3623 4947 * 4454 3007 * 3182 * * * * * 6126 1911 2013 * 3959 80 0 * * * * * 0 4748 0 1000 F 81 * * * * 2884 * * 2239 * 1594 * * * * * * * 1638 * * 81 0 * * * * * 0 4752 0 1000 X 82 4764 * * * 1384 4895 * 3620 * 1470 5913 * * * * * * 4103 * 5094 82 0 * * * * * 0 4672 0 1000 S 83 * 5644 5883 * * * * 3972 * 5817 * 4387 5171 * * 782 2284 5698 * * 83 25 5838 * 0 * 0 * 4688 1000 1000 T 84 * * 464 5041 * * * * * * * 5523 3383 * 4259 5823 4636 5873 * * 84 91 4969 5111 1000 1000 * * 4672 1000 0 Q 85 * * 4722 * * * 5702 * 3901 2386 4743 4001 * 2554 4441 3489 2701 2992 * * 85 0 * * * * 0 * 4616 0 1000 T 86 4055 * * 4497 5733 4889 * * 4048 4037 4234 4450 * * 5041 3488 991 * * * 86 41 5147 * 1000 1000 * * 4672 1000 0 S 87 5665 * * 4334 6237 3596 5680 * 2609 6079 2415 2576 5199 5565 3568 3155 4777 * * * 87 0 * * * * * * 4672 0 0 R 88 3690 5041 * 2202 * * 3914 * 3254 * 5278 3699 * 3445 3039 3360 3475 * * * 88 0 * * * * * * 4672 0 0 E 89 * * 3966 424 * * 4908 * * * * * * 4147 * 4856 3911 * * * 89 0 * * * * * * 4672 0 0 V 90 * * * * 3108 * * 1582 * 1985 3589 * * * * * * 2222 * * 90 0 * * * * * * 4661 0 0 T 91 * 4251 * 3222 * 5063 * 5490 1645 5391 * 5022 * 4654 3306 4030 2239 * * * 91 0 * * * * * * 4661 0 0 I 92 * 4256 * * * * * 5475 * * * * * * * 3677 * 240 * * 92 0 * * * * * * 4658 0 0 T 93 5687 4937 * 5083 1420 * * * 3781 3535 * * * 5141 3436 2441 4373 * * 4936 93 0 * * * * * * 4602 0 0 A 94 2161 * * * 6032 * * 3883 * 4266 5645 * 2577 4817 * 1776 4233 3774 * * 94 0 * * * * * * 4602 0 0 N 95 * * 2907 5143 * * 3927 4232 2236 * * 2766 * 3603 2413 3473 * * * * 95 0 * * * * * * 4537 0 0 N 96 * * 560 4862 * * 3311 * * * * 3484 * 5294 * * * * * 3803 96 0 * * * * * * 4537 0 0 L 97 * * * * * * * 3588 * 259 * * * * * * * 3621 * * 97 0 * * * * * * 4424 0 0 S 98 2842 * * * * * * 3926 2806 * * * * 3141 2118 2799 4021 3284 * * 98 0 * * * * * * 4278 0 0 K 99 * * * 952 * * * * 1423 * * * * 4227 4144 * * * * * 99 0 * * 0 * * * 3800 0 0 //