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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c4rfuB_ | PDB header: viral protein | Chain: B: PDB Molecule: coat protein; | PDBTitle: crystal structure of truncated p-domain from grouper nervous necrosis2 virus capsid protein at 1.2a |
Added to library: Sat Oct 10 08:15:12 2015 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | A | P | I | M | T | Q | G | S | L | Y | N | D | S | L | S | T | N | D | F | K | S | I | L | L | G | S | T | P | L | D | I | A | P | D | G | A | V | F | Q | L | D | R | P | L | S | I | D | Y | S | L | G | T | G | D | V | D | R | A | V | Y | W | H | L | K | K | F | A | G | N | A |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | S | ![]() | ![]() | G | G | G | S | S | ![]() | ![]() | G | G | G | G | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | B | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
Sequence | G | T | P | A | G | W | F | R | W | G | I | W | D | N | F | N | K | T | F | T | D | G | V | A | Y | Y | S | D | E | Q | P | R | Q | I | L | L | P | V | G | T | V | C | T | R | V | D | S | |||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | B | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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