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  | Protein Homology/analogY Recognition Engine V 2.0 |
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Fold library id | PDB Header | Molecule | Title |
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c4fb3E_ | PDB header: dna binding protein/dna | Chain: E: PDB Molecule: large t antigen; | PDBTitle: polyomavirus t-ag binds symmetrical repeats at the viral origin in an2 asymmetrical manner |
Added to library: Sat Oct 26 08:26:44 2013 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | S | D | F | P | S | S | L | T | G | Y | L | S | H | A | I | Y | S | N | K | T | F | P | A | F | L | V | Y | S | T | K | E | K | C | K | Q | L | Y | D | T | I | G | K | F | R | P | E | F | K | C | L | V | H | Y | E | E | G | G | M | L | F | F | L | T | M | T | K | H | R | V | S |
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | S | T | T | S | S | S | S | T | T | T | T | S | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |||||||||
Sequence | A | V | K | N | Y | C | S | K | L | C | S | V | S | F | L | M | C | K | A | V | T | K | P | M | E | C | Y | Q | V | V | T | A | A | P | F | Q | L | I | T | E | N | K | P | G | ||||||||||||||||||||||||||
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | S | S | S | S | T | T | S | T | T | S | S |
Download: | PDB structure | FASTA sequence |
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