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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2fz0A_

Fold library idPDB HeaderMoleculeTitle
c2fz0A_PDB header: membrane proteinChain: A: PDB Molecule: v-snare component of the vacuolar snare complexPDBTitle: identification of yeast r-snare nyv1p as a novel longin2 domain protein


Added to library: Tue Mar 16 14:17:34 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKRFNVSYVEVIKNGETISSCFQPFQKNENYGTITSANEQITPVIFHNLIMDMVLPKVVPIKGNKVTKMS
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Known secondary structure (DSSP)





SSSS





SSSSS
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TTGGG



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 .........80.........90.........100.........110.........120.........130.........140
Sequence MNLIDGFDCFYSTDDHDPKTVYVCFTLVDIPKILPIRILSGLQEYESNATNELLSSHVGQILDSFHEELV
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Known secondary structure (DSSP) S

SSS


SS
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STTT
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Sequence EYRNQTLNS
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Known secondary structure (DSSP) TTTSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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