Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionO54836
DateWed Jul 10 14:35:54 BST 2013
Unique Job ID1e5bcc4c260754fb
SequenceMILLQQVWLP ... Download FASTA

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:48.579 Y:49.688 Z:46.799
Model (left) based on template c4ijdA_
Top template information
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase prdm9;
PDBTitle: crystal structure of methyltransferase domain of human pr domain-2 containing protein 9
Confidence and coverage
Confidence: 99.4% Coverage: 65%
188 residues ( 65% of your sequence) have been modelled with 99.4% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Warning: 51% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MILLQQVWLPLPNRPSTSPPMSVAARSTRTLQLPPQKAFGQEASLPLAGEEDLAKRGEPD
Secondary structure 
SS confidence 
Disorder  ????????????????????????????????????????????????????????????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  SALEELCKPLFCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARVSSVVAEP
Secondary structure 
SS confidence 
Disorder  ???
?
??????????????
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  VATPLVPVPPQVGSCKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAE
Secondary structure 
SS confidence 
Disorder 
???????????????
?
?
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  AQSHSFSDSAEAGQRRTRKEGSEFKMVATRRNMNPVQSNSGPYFNARSRQRIPRDLAMCV
Secondary structure 
SS confidence 
Disorder  ??????????????????????
?????
?
?
?
??????????
Disorder confidence 
 
   .........250.........260.........270.........280.........290
Sequence  TPSGQFYCSMCNVGAGEEVEFRQHLESKQHKSKVSEQRYRSEMENLGYVQ
Secondary structure 
SS confidence 
Disorder  ?
?
?
?
?
????????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered ( 51%)
Alpha helix ( 32%)
Beta strand ( 5%)

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 4ijd chain A

3D model

Region: 64 - 270
Aligned: 188
Modelled: 192
Confidence: 99.4%
Identity: 11%
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase prdm9;
PDBTitle: crystal structure of methyltransferase domain of human pr domain-2 containing protein 9

Phyre2

PDB 1zu1 chain A

3D model

Region: 64 - 181
Aligned: 99
Modelled: 99
Confidence: 99.4%
Identity: 35%
PDB header:rna binding protein
Chain: A: PDB Molecule:rna binding protein zfa;
PDBTitle: solution structure of the n-terminal zinc fingers of the2 xenopus laevis double stranded rna binding protein zfa

Phyre2

PDB 2dmi chain A

3D model

Region: 53 - 182
Aligned: 113
Modelled: 113
Confidence: 99.3%
Identity: 15%
PDB header:transcription
Chain: A: PDB Molecule:teashirt homolog 3;
PDBTitle: solution structure of the first and the second zf-c2h2 like2 domains of human teashirt homolog 3

Phyre2

PDB 2csh chain A

3D model

Region: 60 - 191
Aligned: 107
Modelled: 110
Confidence: 99.1%
Identity: 15%
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 297b;
PDBTitle: solution structure of tandem repeat of the zf-c2h2 domains2 of human zinc finger protein 297b

Phyre2

PDB 1tf6 chain D

3D model

Region: 64 - 171
Aligned: 108
Modelled: 108
Confidence: 99.1%
Identity: 12%
PDB header:transcription/dna
Chain: D: PDB Molecule:protein (transcription factor iiia);
PDBTitle: co-crystal structure of xenopus tfiiia zinc finger domain2 bound to the 5s ribosomal rna gene internal control region

Phyre2

PDB 2dmd chain A

3D model

Region: 62 - 178
Aligned: 95
Modelled: 95
Confidence: 99.1%
Identity: 13%
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 64, isoforms 1 and 2;
PDBTitle: solution structure of the n-terminal c2h2 type zinc-binding2 domain of the zinc finger protein 64, isoforms 1 and 2

Phyre2

PDB 2wbt chain A

3D model

Region: 63 - 270
Aligned: 119
Modelled: 120
Confidence: 99.1%
Identity: 17%
PDB header:dna-binding protein
Chain: A: PDB Molecule:b-129;
PDBTitle: the structure of a double c2h2 zinc finger protein from a2 hyperthermophilic archaeal virus in the absence of dna

Phyre2

PDB 2rpc chain A

3D model

Region: 45 - 282
Aligned: 153
Modelled: 158
Confidence: 99.0%
Identity: 14%
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein zic 3;
PDBTitle: solution structure of the tandem zf-c2h2 domains from the2 human zinc finger protein zic 3

Phyre2

PDB 2ee8 chain A

3D model

Region: 54 - 178
Aligned: 103
Modelled: 103
Confidence: 99.0%
Identity: 11%
PDB header:gene regulation
Chain: A: PDB Molecule:protein odd-skipped-related 2;
PDBTitle: solution structure of three zf-c2h2 domains from mouse2 protein odd-skipped-related 2 splicing isoform 2

Phyre2

PDB 1g2d chain C

3D model

Region: 66 - 174
Aligned: 87
Modelled: 87
Confidence: 99.0%
Identity: 14%
PDB header:transcription/dna
Chain: C: PDB Molecule:tata box zinc finger protein;
PDBTitle: structure of a cys2his2 zinc finger/tata box complex (clone2 #2)

Phyre2

PDB 2dlq chain A

3D model

Region: 142 - 270
Aligned: 117
Modelled: 129
Confidence: 98.9%
Identity: 15%
PDB header:transcription
Chain: A: PDB Molecule:gli-kruppel family member hkr3;
PDBTitle: solution structure of the tandem four zf-c2h2 domain2 repeats of murine gli-kruppel family member hkr3

Phyre2

PDB 2i13 chain A

3D model

Region: 129 - 267
Aligned: 136
Modelled: 139
Confidence: 98.9%
Identity: 13%
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:aart;
PDBTitle: aart, a six finger zinc finger designed to recognize ann triplets

Phyre2

PDB 2rsi chain A

3D model

Region: 62 - 175
Aligned: 91
Modelled: 91
Confidence: 98.9%
Identity: 13%
PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein zfat;
PDBTitle: solution structures of the dna-binding domains of immune-related zinc-2 finger protein zfat

Phyre2

PDB 2rsj chain A

3D model

Region: 139 - 270
Aligned: 88
Modelled: 89
Confidence: 98.9%
Identity: 19%
PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein zfat;
PDBTitle: solution structures of the dna-binding domains of immune-related zinc-2 finger protein zfat

Phyre2

PDB 1wjp chain A

3D model

Region: 54 - 173
Aligned: 95
Modelled: 96
Confidence: 98.8%
Identity: 18%
PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein 295;
PDBTitle: solution structure of zf-c2h2 domains from human zinc2 finger protein 295

Phyre2

PDB 2kmk chain A

3D model

Region: 69 - 172
Aligned: 82
Modelled: 81
Confidence: 98.8%
Identity: 16%
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:zinc finger protein gfi-1;
PDBTitle: gfi-1 zinc fingers 3-5 complexed with dna

Phyre2

PDB 1x6h chain A

3D model

Region: 133 - 288
Aligned: 85
Modelled: 90
Confidence: 98.8%
Identity: 21%
PDB header:dna binding protein
Chain: A: PDB Molecule:transcriptional repressor ctcf;
PDBTitle: solution structures of the c2h2 type zinc finger domain of2 human transcriptional repressor ctcf

Phyre2

PDB 2ebt chain A

3D model

Region: 55 - 171
Aligned: 97
Modelled: 97
Confidence: 98.8%
Identity: 16%
PDB header:transcription
Chain: A: PDB Molecule:krueppel-like factor 5;
PDBTitle: solution structure of three tandem repeats of zf-c2h22 domains from human kruppel-like factor 5

Phyre2

PDB 4f6n chain A

3D model

Region: 63 - 181
Aligned: 97
Modelled: 97
Confidence: 98.7%
Identity: 14%
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:transcriptional regulator kaiso;
PDBTitle: crystal structure of kaiso zinc finger dna binding protein in complex2 with methylated cpg site dna

Phyre2

PDB 2yt9 chain A

3D model

Region: 142 - 266
Aligned: 85
Modelled: 85
Confidence: 98.7%
Identity: 16%
PDB header:transcription
Chain: A: PDB Molecule:zinc finger-containing protein 1;
PDBTitle: solution structure of c2h2 type zinc finger domain 345 in2 zinc finger protein 278

Phyre2

PDB 1zr9 chain A domain 1

3D model

Region: 242 - 280
Aligned: 39
Modelled: 39
Confidence: 98.3%
Identity: 21%
Fold: beta-beta-alpha zinc fingers
Superfamily: beta-beta-alpha zinc fingers
Family: HkH motif-containing C2H2 finger

Phyre2

PDB 1yuj chain A

3D model

Region: 46 - 89
Aligned: 44
Modelled: 44
Confidence: 82.9%
Identity: 16%
Fold: beta-beta-alpha zinc fingers
Superfamily: beta-beta-alpha zinc fingers
Family: Classic zinc finger, C2H2

Phyre2
1
c4ijdA_
2
c1zu1A_
3
c2dmiA_
4
c2cshA_
5
c1tf6D_
6
c2dmdA_
7
c2wbtA_
8
c2rpcA_
9
c2ee8A_
10
c1g2dC_
11
c2dlqA_
12
c2i13A_
13
c2rsiA_
14
c2rsjA_
15
c1wjpA_
16
c2kmkA_
17
c1x6hA_
18
c2ebtA_
19
c4f6nA_
20
c2yt9A_
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22
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d1zr9a1
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d1yuja_
189
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4ijdA_
99.4 11 PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase prdm9;
PDBTitle: crystal structure of methyltransferase domain of human pr domain-2 containing protein 9
2c1zu1A_
99.4 35 PDB header:rna binding protein
Chain: A: PDB Molecule:rna binding protein zfa;
PDBTitle: solution structure of the n-terminal zinc fingers of the2 xenopus laevis double stranded rna binding protein zfa
3c2dmiA_
99.3 15 PDB header:transcription
Chain: A: PDB Molecule:teashirt homolog 3;
PDBTitle: solution structure of the first and the second zf-c2h2 like2 domains of human teashirt homolog 3
4c2cshA_
99.1 15 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 297b;
PDBTitle: solution structure of tandem repeat of the zf-c2h2 domains2 of human zinc finger protein 297b
5c1tf6D_
99.1 12 PDB header:transcription/dna
Chain: D: PDB Molecule:protein (transcription factor iiia);
PDBTitle: co-crystal structure of xenopus tfiiia zinc finger domain2 bound to the 5s ribosomal rna gene internal control region
6c2dmdA_
99.1 13 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 64, isoforms 1 and 2;
PDBTitle: solution structure of the n-terminal c2h2 type zinc-binding2 domain of the zinc finger protein 64, isoforms 1 and 2
7c2wbtA_
99.1 17 PDB header:dna-binding protein
Chain: A: PDB Molecule:b-129;
PDBTitle: the structure of a double c2h2 zinc finger protein from a2 hyperthermophilic archaeal virus in the absence of dna
8c2rpcA_
99.0 14 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein zic 3;
PDBTitle: solution structure of the tandem zf-c2h2 domains from the2 human zinc finger protein zic 3
9c2ee8A_
99.0 11 PDB header:gene regulation
Chain: A: PDB Molecule:protein odd-skipped-related 2;
PDBTitle: solution structure of three zf-c2h2 domains from mouse2 protein odd-skipped-related 2 splicing isoform 2
10c1g2dC_
99.0 14 PDB header:transcription/dna
Chain: C: PDB Molecule:tata box zinc finger protein;
PDBTitle: structure of a cys2his2 zinc finger/tata box complex (clone2 #2)
11c2dlqA_
98.9 15 PDB header:transcription
Chain: A: PDB Molecule:gli-kruppel family member hkr3;
PDBTitle: solution structure of the tandem four zf-c2h2 domain2 repeats of murine gli-kruppel family member hkr3
12c2i13A_
98.9 13 PDB header:dna binding protein/dna
Chain: A: PDB Molecule:aart;
PDBTitle: aart, a six finger zinc finger designed to recognize ann triplets
13c2rsiA_
98.9 13 PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein zfat;
PDBTitle: solution structures of the dna-binding domains of immune-related zinc-2 finger protein zfat
14c2rsjA_
98.9 19 PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein zfat;
PDBTitle: solution structures of the dna-binding domains of immune-related zinc-2 finger protein zfat
15c1wjpA_
98.8 18 PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein 295;
PDBTitle: solution structure of zf-c2h2 domains from human zinc2 finger protein 295
16c2kmkA_
98.8 16 PDB header:dna binding protein/dna
Chain: A: PDB Molecule:zinc finger protein gfi-1;
PDBTitle: gfi-1 zinc fingers 3-5 complexed with dna
17c1x6hA_
98.8 21 PDB header:dna binding protein
Chain: A: PDB Molecule:transcriptional repressor ctcf;
PDBTitle: solution structures of the c2h2 type zinc finger domain of2 human transcriptional repressor ctcf
18c2ebtA_
98.8 16 PDB header:transcription
Chain: A: PDB Molecule:krueppel-like factor 5;
PDBTitle: solution structure of three tandem repeats of zf-c2h22 domains from human kruppel-like factor 5
19c4f6nA_
98.7 14 PDB header:dna binding protein/dna
Chain: A: PDB Molecule:transcriptional regulator kaiso;
PDBTitle: crystal structure of kaiso zinc finger dna binding protein in complex2 with methylated cpg site dna
20c2yt9A_
98.7 16 PDB header:transcription
Chain: A: PDB Molecule:zinc finger-containing protein 1;
PDBTitle: solution structure of c2h2 type zinc finger domain 345 in2 zinc finger protein 278
21c1x5wA_
not modelled 98.6 14 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 64, isoforms 1;
PDBTitle: solution structure of the c2h2 type zinc-binding domain of2 human zinc finger protein 64, isoforms 1 and 2
22c2ct1A_
not modelled 98.6 25 PDB header:transcription
Chain: A: PDB Molecule:transcriptional repressor ctcf;
PDBTitle: solution structure of the zinc finger domain of2 transcriptional repressor ctcf protein
23c4gznC_
not modelled 98.6 26 PDB header:transcription/dna
Chain: C: PDB Molecule:zinc finger protein 57;
PDBTitle: mouse zfp57 zinc fingers in complex with methylated dna
24c2lceA_
not modelled 98.6 27 PDB header:transcription regulator
Chain: A: PDB Molecule:b-cell lymphoma 6 protein;
PDBTitle: chemical shift assignment of hr4436b from homo sapiens, northeast2 structural genomics consortium
25c1llmC_
not modelled 98.6 17 PDB header:transcription/dna
Chain: C: PDB Molecule:chimera of zif23-gcn4;
PDBTitle: crystal structure of a zif23-gcn4 chimera bound to dna
26c1tf3A_
not modelled 98.6 22 PDB header:transcription/dna
Chain: A: PDB Molecule:transcription factor iiia;
PDBTitle: tfiiia finger 1-3 bound to dna, nmr, 22 structures
27c2d9hA_
not modelled 98.6 28 PDB header:dna binding protein
Chain: A: PDB Molecule:zinc finger protein 692;
PDBTitle: solution structure of the forth and fifth zf-c2h2 domains2 of zinc finger protein 692
28c2gliA_
not modelled 98.5 9 PDB header:transcription/dna
Chain: A: PDB Molecule:protein (five-finger gli);
PDBTitle: five-finger gli/dna complex
29c2lv2A_
not modelled 98.5 21 PDB header:transcription
Chain: A: PDB Molecule:insulinoma-associated protein 1;
PDBTitle: solution nmr structure of c2h2-type zinc-fingers 4 and 5 from human2 insulinoma-associated protein 1 (fragment 424-497), northeast3 structural genomics consortium target hr7614b
30d2csha1
not modelled 98.5 25 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
31c2adrA_
not modelled 98.5 22 PDB header:transcription regulation
Chain: A: PDB Molecule:adr1;
PDBTitle: adr1 dna-binding domain from saccharomyces cerevisiae, nmr,2 25 structures
32c2prtA_
not modelled 98.5 10 PDB header:transcription/dna
Chain: A: PDB Molecule:wilms tumor 1;
PDBTitle: structure of the wilms tumor suppressor protein zinc finger2 domain bound to dna
33c2drpD_
not modelled 98.4 24 PDB header:transcription/dna
Chain: D: PDB Molecule:protein (tramtrack dna-binding domain);
PDBTitle: the crystal structure of a two zinc-finger peptide reveals2 an extension to the rules for zinc-finger/dna recognition
34c2epaA_
not modelled 98.4 20 PDB header:transcription
Chain: A: PDB Molecule:krueppel-like factor 10;
PDBTitle: solution structure of the first and second zf-c2h2 domains2 from human krueppel-like factor 10
35c1f2iI_
not modelled 98.4 22 PDB header:transcription/dna
Chain: I: PDB Molecule:fusion of n-terminal 17-mer peptide extension to
PDBTitle: cocrystal structure of selected zinc finger dimer bound to2 dna
36c1bboA_
not modelled 98.4 20 PDB header:dna-binding protein
Chain: A: PDB Molecule:human enhancer-binding protein mbp-1;
PDBTitle: high-resolution solution structure of the double cys2*his22 zinc finger from the human enhancer binding protein mbp-1
37c2ej4A_
not modelled 98.3 19 PDB header:gene regulation
Chain: A: PDB Molecule:zinc finger protein zic 3;
PDBTitle: functional and structural basis of nuclear localization2 signal in zic3 zinc finger domain: a role of conserved3 tryptophan residue in the zinc finger domain
38d1zr9a1
98.3 21 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:HkH motif-containing C2H2 finger
39c1zr9A_
not modelled 98.3 21 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 593;
PDBTitle: solution structure of a human c2h2-type zinc finger protein
40c1un6D_
not modelled 98.3 19 PDB header:rna-binding protein/rna
Chain: D: PDB Molecule:transcription factor iiia;
PDBTitle: the crystal structure of a zinc finger - rna complex2 reveals two modes of molecular recognition
41c1ubdC_
not modelled 98.3 6 PDB header:transcription/dna
Chain: C: PDB Molecule:protein (yy1 zinc finger domain);
PDBTitle: co-crystal structure of human yy1 zinc finger domain bound2 to the adeno-associated virus p5 initiator element
42c2cotA_
not modelled 98.3 18 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 435;
PDBTitle: solution structure of the first and second zf-c2h2 domain2 of zinc finger protein 435
43c3uk3D_
not modelled 98.2 21 PDB header:dna/metal binding protein
Chain: D: PDB Molecule:zinc finger protein 217;
PDBTitle: crystal structure of znf217 bound to dna
44c1x6eA_
not modelled 98.2 14 PDB header:dna binding protein
Chain: A: PDB Molecule:zinc finger protein 24;
PDBTitle: solution structures of the c2h2 type zinc finger domain of2 human zinc finger protein 24
45c2dlkA_
not modelled 98.2 16 PDB header:dna binding protein
Chain: A: PDB Molecule:novel protein;
PDBTitle: solution structure of the first and the second zf-c2h22 domains of zinc finger protein 692
46c2ghfA_
not modelled 98.1 16 PDB header:transcription, metal binding protein
Chain: A: PDB Molecule:zinc fingers and homeoboxes protein 1;
PDBTitle: solution structure of the complete zinc-finger region of2 human zinc-fingers and homeoboxes 1 (zhx1)
47d1zu1a2
not modelled 98.1 13 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:HkH motif-containing C2H2 finger
48c2ctdA_
not modelled 98.1 19 PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein 512;
PDBTitle: solution structure of two zf-c2h2 domains from human zinc2 finger protein 512
49c2gqjA_
not modelled 98.0 22 PDB header:gene regulation
Chain: A: PDB Molecule:zinc finger protein kiaa1196;
PDBTitle: solution structure of the two zf-c2h2 like domains(493-575)2 of human zinc finger protein kiaa1196
50c2epsA_
not modelled 98.0 30 PDB header:transcription
Chain: A: PDB Molecule:poz-, at hook-, and zinc finger-containing
PDBTitle: solution structure of the 4th zinc finger domain of zinc2 finger protein 278
51c2ythA_
not modelled 97.8 13 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 224;
PDBTitle: solution structure of the c2h2 type zinc finger (region 479-2 511) of human zinc finger protein 224
52c2epzA_
not modelled 97.7 16 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 28 homolog;
PDBTitle: solution structure of the 4th c2h2 type zinc finger domain2 of zinc finger protein 28 homolog
53c2eq4A_
not modelled 97.6 21 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 224;
PDBTitle: solution structure of the 11th c2h2 type zinc finger domain2 of zinc finger protein 224
54c2eoqA_
not modelled 97.6 17 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 224;
PDBTitle: solution structure of the c2h2 type zinc finger (region 283-2 315) of human zinc finger protein 224
55c2ytjA_
not modelled 97.6 13 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 484;
PDBTitle: solution structure of the c2h2 type zinc finger (region 771-2 803) of human zinc finger protein 484
56c2emcA_
not modelled 97.6 16 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the c2h2 type zinc finger (region 641-2 673) of human zinc finger protein 473
57c2em4A_
not modelled 97.6 14 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 28 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 724-2 756) of human zinc finger protein 28 homolog
58c2ytbA_
not modelled 97.6 12 PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein 32;
PDBTitle: solution structure of c2h2 type zinc finger domain 5 in2 zinc finger protein 32
59c2emlA_
not modelled 97.6 17 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 28 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 752-2 784) of human zinc finger protein 28 homolog
60c2en6A_
not modelled 97.6 18 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 268;
PDBTitle: solution structure of the c2h2 type zinc finger (region 887-2 919) of human zinc finger protein 268
61c2eozA_
not modelled 97.6 16 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the c2h2 type zinc finger (region 809-2 841) of human zinc finger protein 473
62c2ytmA_
not modelled 97.6 12 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 28 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 696-2 728) of human zinc finger protein 28 homolog
63c2epuA_
not modelled 97.6 16 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 32;
PDBTitle: solution structure of the secound c2h2 type zinc finger2 domain of zinc finger protein 32
64c2eohA_
not modelled 97.6 14 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 28 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 780-2 812) of human zinc finger protein 28 homolog
65c2emzA_
not modelled 97.6 14 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 95 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 628-2 660) of human zinc finger protein 95 homolog
66c2eovA_
not modelled 97.6 16 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 484;
PDBTitle: solution structure of the c2h2 type zinc finger (region 519-2 551) of human zinc finger protein 484
67c2yttA_
not modelled 97.5 19 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the c2h2 type zinc finger (region 204-2 236) of human zinc finger protein 473
68c2em3A_
not modelled 97.5 18 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 28 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 640-2 672) of human zinc finger protein 28 homolog
69c2eomA_
not modelled 97.5 13 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 95 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 341-2 373) of human zinc finger protein 95 homolog
70c2entA_
not modelled 97.5 17 PDB header:transcription
Chain: A: PDB Molecule:krueppel-like factor 15;
PDBTitle: solution structure of the second c2h2-type zinc finger2 domain from human krueppel-like factor 15
71d2cota2
not modelled 97.5 16 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
72c2em0A_
not modelled 97.5 18 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 224;
PDBTitle: solution structure of the 18th zf-c2h2 domain from human2 zinc finger protein 224
73c2epwA_
not modelled 97.5 15 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 268;
PDBTitle: solution structure of the 24th c2h2 type zinc finger domain2 of zinc finger protein 268
74c2epqA_
not modelled 97.5 11 PDB header:transcription
Chain: A: PDB Molecule:poz-, at hook-, and zinc finger-containing
PDBTitle: solution structure of the third zinc finger domain of zinc2 finger protein 278
75c3eplA_
not modelled 97.5 25 PDB header:transferase/rna
Chain: A: PDB Molecule:trna isopentenyltransferase;
PDBTitle: crystallographic snapshots of eukaryotic2 dimethylallyltransferase acting on trna: insight into trna3 recognition and reaction mechanism
76d1p7aa_
not modelled 97.4 24 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
77c2elqA_
not modelled 97.4 22 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 406;
PDBTitle: solution structure of the 14th c2h2 zinc finger of human2 zinc finger protein 406
78c2elzA_
not modelled 97.4 13 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 224;
PDBTitle: solution structure of the 17th zf-c2h2 domain from human2 zinc finger protein 224
79c2epcA_
not modelled 97.4 13 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 32;
PDBTitle: solution structure of zinc finger domain 7 in zinc finger2 protein 32
80c2emwA_
not modelled 97.4 18 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 268;
PDBTitle: solution structure of the c2h2 type zinc finger (region 301-2 331) of human zinc finger protein 268
81c2eltA_
not modelled 97.4 17 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 406;
PDBTitle: solution structure of the 3rd c2h2 zinc finger of human2 zinc finger protein 406
82c2ytaA_
not modelled 97.4 21 PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein 32;
PDBTitle: solution structure of c2h2 type zinc finger domain 3 in2 zinc finger protein 32
83c2en2A_
not modelled 97.4 17 PDB header:transcription
Chain: A: PDB Molecule:b-cell lymphoma 6 protein;
PDBTitle: solution structure of the c2h2 type zinc finger (region 598-2 626) of human b-cell lymphoma 6 protein
84c2ysvA_
not modelled 97.4 12 PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of c2h2 type zinc finger domain 17 in2 zinc finger protein 473
85c2eooA_
not modelled 97.4 16 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 95 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 425-2 457) of human zinc finger protein 95 homolog
86c2yu5A_
not modelled 97.3 16 PDB header:rna binding protein
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the zf-c2h2 domain (669-699aa) in2 zinc finger protein 473
87d2ct1a2
not modelled 97.3 20 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
88c2el5A_
not modelled 97.3 14 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 268;
PDBTitle: solution structure of the 18th zf-c2h2 domain from human2 zinc finger protein 268
89c2em5A_
not modelled 97.3 17 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 95 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 768-2 800) of human zinc finger protein 95 homolog
90d1x6ha2
not modelled 97.2 19 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
91d2epra1
not modelled 97.2 15 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
92c2en3A_
not modelled 97.2 18 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 95 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 796-2 828) of human zinc finger protein 95 homolog
93d1x6ea1
not modelled 97.2 15 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
94d1srka_
not modelled 97.2 17 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
95c2elsA_
not modelled 97.2 22 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 406;
PDBTitle: solution structure of the 2nd c2h2 zinc finger of human2 zinc finger protein 406
96c2eoxA_
not modelled 97.2 13 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the c2h2 type zinc finger (region 315-2 345) of human zinc finger protein 473
97c2yteA_
not modelled 97.2 16 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the c2h2 type zinc finger (region 484-2 512) of human zinc finger protein 473
98c2eprA_
not modelled 97.1 13 PDB header:transcription
Chain: A: PDB Molecule:poz-, at hook-, and zinc finger-containing
PDBTitle: solution structure of the secound zinc finger domain of2 zinc finger protein 278
99d1xf7a_
not modelled 97.1 24 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
100c1xf7A_
not modelled 97.1 24 PDB header:transcription
Chain: A: PDB Molecule:wilms' tumor protein;
PDBTitle: high resolution nmr structure of the wilms' tumor2 suppressor protein (wt1) finger 3
101c2en8A_
not modelled 97.1 16 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 224;
PDBTitle: solution structure of the c2h2 type zinc finger (region 171-2 203) of human zinc finger protein 224
102d2epsa1
not modelled 97.1 14 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
103c1areA_
not modelled 97.1 17 PDB header:transcription regulation
Chain: A: PDB Molecule:yeast transcription factor adr1;
PDBTitle: structures of dna-binding mutant zinc finger domains:2 implications for dna binding
104c1meyG_
not modelled 97.1 21 PDB header:transferase/dna
Chain: G: PDB Molecule:consensus zinc finger;
PDBTitle: crystal structure of a designed zinc finger protein bound2 to dna
105c2lvrA_
not modelled 97.1 24 PDB header:transcription
Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 17;
PDBTitle: solution structure of miz-1 zinc finger 8
106d2adra1
not modelled 97.0 17 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
107c1arfA_
not modelled 97.0 17 PDB header:transcription regulation
Chain: A: PDB Molecule:yeast transcription factor adr1;
PDBTitle: structures of dna-binding mutant zinc finger domains:2 implications for dna binding
108c2lvtA_
not modelled 97.0 28 PDB header:transcription
Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 17;
PDBTitle: solution structure of miz-1 zinc finger 9
109d1u85a1
not modelled 97.0 24 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
110c1ardA_
not modelled 97.0 17 PDB header:transcription regulation
Chain: A: PDB Molecule:yeast transcription factor adr1;
PDBTitle: structures of dna-binding mutant zinc finger domains:2 implications for dna binding
111d1zu1a1
not modelled 96.9 38 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:HkH motif-containing C2H2 finger
112d1sp1a_
not modelled 96.9 17 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
113c1sp1A_
not modelled 96.9 17 PDB header:zinc finger
Chain: A: PDB Molecule:sp1f3;
PDBTitle: nmr structure of a zinc finger domain from transcription2 factor sp1f3, minimized average structure
114c1va3A_
not modelled 96.9 17 PDB header:transcription
Chain: A: PDB Molecule:transcription factor sp1;
PDBTitle: solution structure of transcription factor sp1 dna binding2 domain (zinc finger 3)
115c2m0fA_
not modelled 96.8 21 PDB header:transcription
Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 17;
PDBTitle: solution structure of miz-1 zinc finger 7
116d1a1ia2
not modelled 96.8 18 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
117d4znfa_
not modelled 96.8 30 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
118c4znfA_
not modelled 96.8 30 PDB header:zinc finger dna binding domain
Chain: A: PDB Molecule:zinc finger;
PDBTitle: high-resolution three-dimensional structure of a single2 zinc finger from a human enhancer binding protein in3 solution
119c3znfA_
not modelled 96.8 30 PDB header:zinc finger dna binding domain
Chain: A: PDB Molecule:zinc finger;
PDBTitle: high-resolution three-dimensional structure of a single2 zinc finger from a human enhancer binding protein in3 solution
120d2cota1
not modelled 96.7 19 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2

Binding site prediction 

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