Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionO13297
DateMon Jul 2 19:10:04 BST 2012
Unique Job IDe0d02f148dc4d9b7

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template d1d8ia_
Top template information
Fold:CYTH-like phosphatases
Superfamily:CYTH-like phosphatases
Family:mRNA triphosphatase CET1
Confidence and coverage
Confidence:100.0% Coverage: 52%
286 residues ( 52% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Warning: 62% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MSYTDNPPQTKRALSLDDLVNHDENEKVKLQKLSEAANGSRPFAENLESDINQTETGQAA
Secondary structure 
SS confidence 
Disorder  ??????????????
?????????????????????????????????????????????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  PIDNYKESTGHGSHSQKPKSRKSSNDDEETDTDDEMGASGEINFDSEMDFDYDKQHRNLL
Secondary structure 
SS confidence 
Disorder  ????????????????????????????????????????????????????????????
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  SNGSPPMNDGSDANAKLEKPSDDSIHQNSKSDEEQRIPKQGNEGNIASNYITQVPLQKQK
Secondary structure 
SS confidence 
Disorder  ????????????????????????????????????????????????????????????
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  QTEKKIAGNAVGSVVKKEEEANAAVDNIFEEKATLQSKKNNIKRDLEVLNEISASSKPSK
Secondary structure 
SS confidence 
Disorder  ????????????????????????????????????????????????????????????
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  YRNVPIWAQKWKPTIKALQSINVKDLKIDPSFLNIIPDDDLTKSVQDWVYATIYSIAPEL
Secondary structure 
SS confidence 
Disorder  ????????????????????????????
?
???
Disorder confidence 
 
   .........310.........320.........330.........340.........350.........360
Sequence  RSFIELEMKFGVIIDAKGPDRVNPPVSSQCVFTELDAHLTPNIDASLFKELSKYIRGISE
Secondary structure 
SS confidence 
Disorder  ?
???
?
????
?????
???
Disorder confidence 
 
   .........370.........380.........390.........400.........410.........420
Sequence  VTENTGKFSIIESQTRDSVYRVGLSTQRPRFLRMSTDIKTGRVGQFIEKRHVAQLLLYSP
Secondary structure 
SS confidence 
Disorder  ??????
??????
Disorder confidence 
 
   .........430.........440.........450.........460.........470.........480
Sequence  KDSYDVKISLNLELPVPDNDPPEKYKSQSPISERTKDRVSYIHNDSCTRIDITKVENHNQ
Secondary structure 
SS confidence 
Disorder 
????????????????
?
???
Disorder confidence 
 
   .........490.........500.........510.........520.........530.........540
Sequence  NSKSRQSETTHEVELEINTPALLNAFDNITNDSKEYASLIRTFLNNGTIIRRKLSSLSYE
Secondary structure 
SS confidence 
Disorder  ?????????
?????
Disorder confidence 
 
   .........
Sequence  IFEGSKKVM
Secondary structure 
SS confidence 
Disorder 
??????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 1d8i chain A

3D model

Region: 241 - 539
Aligned: 286
Modelled: 299
Confidence: 100.0%
Identity: 100%
Fold: CYTH-like phosphatases
Superfamily: CYTH-like phosphatases
Family: mRNA triphosphatase CET1

Phyre2

PDB 3bgy chain A

3D model

Region: 422 - 497
Aligned: 75
Modelled: 76
Confidence: 91.8%
Identity: 29%
PDB header:hydrolase, viral protein
Chain: A: PDB Molecule:polynucleotide 5'-triphosphatase;
PDBTitle: triclinic structure of mimivirus capping enzyme2 triphosphatase at 1.65 a

Phyre2

PDB 1bj4 chain A

3D model

Region: 500 - 546
Aligned: 45
Modelled: 47
Confidence: 52.4%
Identity: 18%
Fold: PLP-dependent transferase-like
Superfamily: PLP-dependent transferases
Family: GABA-aminotransferase-like

Phyre2

PDB 3t1e chain E

3D model

Region: 522 - 541
Aligned: 20
Modelled: 20
Confidence: 30.5%
Identity: 45%
PDB header:hydrolase
Chain: E: PDB Molecule:hemagglutinin-neuraminidase;
PDBTitle: the structure of the newcastle disease virus hemagglutinin-2 neuraminidase (hn) ectodomain reveals a 4-helix bundle stalk

Phyre2

PDB 2epq chain A domain 1

3D model

Region: 455 - 461
Aligned: 7
Modelled: 7
Confidence: 27.8%
Identity: 71%
Fold: beta-beta-alpha zinc fingers
Superfamily: beta-beta-alpha zinc fingers
Family: Classic zinc finger, C2H2

Phyre2

PDB 1yll chain A domain 1

3D model

Region: 424 - 430
Aligned: 7
Modelled: 7
Confidence: 27.0%
Identity: 14%
Fold: Double-stranded beta-helix
Superfamily: RmlC-like cupins
Family: PA5104-like

Phyre2

PDB 2a7v chain A domain 1

3D model

Region: 500 - 545
Aligned: 44
Modelled: 46
Confidence: 25.4%
Identity: 16%
Fold: PLP-dependent transferase-like
Superfamily: PLP-dependent transferases
Family: GABA-aminotransferase-like

Phyre2

PDB 2a7v chain A

3D model

Region: 500 - 545
Aligned: 44
Modelled: 46
Confidence: 25.4%
Identity: 16%
PDB header:transferase
Chain: A: PDB Molecule:serine hydroxymethyltransferase;
PDBTitle: human mitochondrial serine hydroxymethyltransferase 2

Phyre2

PDB 2gfg chain B

3D model

Region: 450 - 523
Aligned: 55
Modelled: 74
Confidence: 24.5%
Identity: 15%
PDB header:unknown function
Chain: B: PDB Molecule:bh2851;
PDBTitle: crystal structure of a putative adenylate cyclase (bh2851) from2 bacillus halodurans at 2.12 a resolution

Phyre2

PDB 2rrh chain A

3D model

Region: 328 - 356
Aligned: 27
Modelled: 29
Confidence: 23.1%
Identity: 26%
PDB header:hormone
Chain: A: PDB Molecule:vip peptides;
PDBTitle: nmr structure of vasoactive intestinal peptide in methanol

Phyre2

PDB 3ebn chain D

3D model

Region: 281 - 295
Aligned: 15
Modelled: 15
Confidence: 22.7%
Identity: 33%
PDB header:hydrolase
Chain: D: PDB Molecule:replicase polyprotein 1ab;
PDBTitle: a special dimerization of sars-cov main protease c-terminal2 domain due to domain-swapping

Phyre2

PDB 3esg chain A

3D model

Region: 424 - 430
Aligned: 7
Modelled: 7
Confidence: 20.4%
Identity: 14%
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of hutd from pseudomonas fluorescens sbw25

Phyre2

PDB 1qlo chain A

3D model

Region: 518 - 546
Aligned: 29
Modelled: 29
Confidence: 20.0%
Identity: 24%
PDB header:membrane proteins
Chain: A: PDB Molecule:herpes simplex virus protein icp47;
PDBTitle: structure of the active domain of the herpes simplex virus2 protein icp47 in water/sodium dodecyl sulfate solution3 determined by nuclear magnetic resonance spectroscopy

Phyre2

PDB 1ov9 chain A

3D model

Region: 518 - 543
Aligned: 25
Modelled: 26
Confidence: 18.4%
Identity: 28%
Fold: H-NS histone-like proteins
Superfamily: H-NS histone-like proteins
Family: H-NS histone-like proteins

Phyre2

PDB 1x9b chain A

3D model

Region: 512 - 541
Aligned: 30
Modelled: 30
Confidence: 18.4%
Identity: 30%
Fold: Protozoan pheromone-like
Superfamily: Hypothetical membrane protein Ta0354, soluble domain
Family: Hypothetical membrane protein Ta0354, soluble domain

Phyre2

PDB 1hs7 chain A

3D model

Region: 514 - 537
Aligned: 24
Modelled: 24
Confidence: 17.8%
Identity: 25%
Fold: STAT-like
Superfamily: t-snare proteins
Family: t-snare proteins

Phyre2

PDB 2ee7 chain A

3D model

Region: 339 - 428
Aligned: 62
Modelled: 62
Confidence: 17.5%
Identity: 26%
PDB header:structural protein
Chain: A: PDB Molecule:sperm flagellar protein 1;
PDBTitle: solution structure of the ch domain from human sperm2 flagellar protein 1

Phyre2

PDB 2ph5 chain A

3D model

Region: 268 - 289
Aligned: 21
Modelled: 22
Confidence: 15.9%
Identity: 19%
PDB header:transferase
Chain: A: PDB Molecule:homospermidine synthase;
PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54

Phyre2

PDB 1eji chain A

3D model

Region: 500 - 545
Aligned: 44
Modelled: 46
Confidence: 15.4%
Identity: 20%
Fold: PLP-dependent transferase-like
Superfamily: PLP-dependent transferases
Family: GABA-aminotransferase-like

Phyre2

PDB 3sy3 chain D

3D model

Region: 450 - 523
Aligned: 55
Modelled: 72
Confidence: 15.2%
Identity: 18%
PDB header:lyase
Chain: D: PDB Molecule:gbaa_1210 protein;
PDBTitle: gbaa_1210 protein, a putative adenylate cyclase, from bacillus2 anthracis

Phyre2
1
d1d8ia_
2
c3bgyA_
3
d1bj4a_
4
c3t1eE_
5
d2epqa1
6
d1ylla1
7
d2a7va1
8
c2a7vA_
9
c2gfgB_
10
c2rrhA_
11
c3ebnD_
12
c3esgA_
13
c1qloA_
14
d1ov9a_
15
d1x9ba_
16
d1hs7a_
17
c2ee7A_
18
c2ph5A_
19
d1ejia_
20
c3sy3D_
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
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88
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90
91



Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1d8ia_
100.0 100 Fold:CYTH-like phosphatases
Superfamily:CYTH-like phosphatases
Family:mRNA triphosphatase CET1
2c3bgyA_
91.8 29 PDB header:hydrolase, viral protein
Chain: A: PDB Molecule:polynucleotide 5'-triphosphatase;
PDBTitle: triclinic structure of mimivirus capping enzyme2 triphosphatase at 1.65 a
3d1bj4a_
52.4 18 Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
4c3t1eE_
30.5 45 PDB header:hydrolase
Chain: E: PDB Molecule:hemagglutinin-neuraminidase;
PDBTitle: the structure of the newcastle disease virus hemagglutinin-2 neuraminidase (hn) ectodomain reveals a 4-helix bundle stalk
5d2epqa1
27.8 71 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
6d1ylla1
27.0 14 Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:PA5104-like
7d2a7va1
25.4 16 Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
8c2a7vA_
25.4 16 PDB header:transferase
Chain: A: PDB Molecule:serine hydroxymethyltransferase;
PDBTitle: human mitochondrial serine hydroxymethyltransferase 2
9c2gfgB_
24.5 15 PDB header:unknown function
Chain: B: PDB Molecule:bh2851;
PDBTitle: crystal structure of a putative adenylate cyclase (bh2851) from2 bacillus halodurans at 2.12 a resolution
10c2rrhA_
23.1 26 PDB header:hormone
Chain: A: PDB Molecule:vip peptides;
PDBTitle: nmr structure of vasoactive intestinal peptide in methanol
11c3ebnD_
22.7 33 PDB header:hydrolase
Chain: D: PDB Molecule:replicase polyprotein 1ab;
PDBTitle: a special dimerization of sars-cov main protease c-terminal2 domain due to domain-swapping
12c3esgA_
20.4 14 PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of hutd from pseudomonas fluorescens sbw25
13c1qloA_
20.0 24 PDB header:membrane proteins
Chain: A: PDB Molecule:herpes simplex virus protein icp47;
PDBTitle: structure of the active domain of the herpes simplex virus2 protein icp47 in water/sodium dodecyl sulfate solution3 determined by nuclear magnetic resonance spectroscopy
14d1ov9a_
18.4 28 Fold:H-NS histone-like proteins
Superfamily:H-NS histone-like proteins
Family:H-NS histone-like proteins
15d1x9ba_
18.4 30 Fold:Protozoan pheromone-like
Superfamily:Hypothetical membrane protein Ta0354, soluble domain
Family:Hypothetical membrane protein Ta0354, soluble domain
16d1hs7a_
17.8 25 Fold:STAT-like
Superfamily:t-snare proteins
Family:t-snare proteins
17c2ee7A_
17.5 26 PDB header:structural protein
Chain: A: PDB Molecule:sperm flagellar protein 1;
PDBTitle: solution structure of the ch domain from human sperm2 flagellar protein 1
18c2ph5A_
15.9 19 PDB header:transferase
Chain: A: PDB Molecule:homospermidine synthase;
PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54
19d1ejia_
15.4 20 Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
20c3sy3D_
15.2 18 PDB header:lyase
Chain: D: PDB Molecule:gbaa_1210 protein;
PDBTitle: gbaa_1210 protein, a putative adenylate cyclase, from bacillus2 anthracis
21d3er7a1
not modelled 14.1 26 Fold:Cystatin-like
Superfamily:NTF2-like
Family:Exig0174-like
22d1yema_
not modelled 13.7 18 Fold:CYTH-like phosphatases
Superfamily:CYTH-like phosphatases
Family:CYTH domain
23c3i9wA_
not modelled 12.8 20 PDB header:transferase
Chain: A: PDB Molecule:sensor protein tors;
PDBTitle: crystal structure of the e. coli histidine kinase sensor2 tors sensor domain
24d2p13a1
not modelled 12.6 11 Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CorC/HlyC domain-like
25c2kvsA_
not modelled 12.4 18 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein mw0776;
PDBTitle: nmr solution structure of q7a1e8 protein from staphylococcus2 aureus: northeast structural genomics consortium target:3 zr215
26d1u5tb1
not modelled 12.1 7 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Vacuolar sorting protein domain
27d2plia1
not modelled 12.0 10 Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CorC/HlyC domain-like
28d2rk5a1
not modelled 11.6 18 Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CorC/HlyC domain-like
29d1b0na1
not modelled 11.0 22 Fold:Dimerisation interlock
Superfamily:SinR repressor dimerisation domain-like
Family:SinR repressor dimerisation domain-like
30c2q6fB_
not modelled 11.0 35 PDB header:hydrolase
Chain: B: PDB Molecule:infectious bronchitis virus (ibv) main protease;
PDBTitle: crystal structure of infectious bronchitis virus (ibv) main2 protease in complex with a michael acceptor inhibitor n3
31c3ic8D_
not modelled 10.8 11 PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:uncharacterized gst-like proteinprotein;
PDBTitle: the crystal structure of a gst-like protein from pseudomonas syringae2 to 2.4a
32d1lm7a_
not modelled 10.5 29 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Plakin repeat
Family:Plakin repeat
33c4eiuA_
not modelled 10.1 33 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized hypothetical protein;
PDBTitle: crystal structure of a hypothetical protein (bacuni_03093) from2 bacteroides uniformis atcc 8492 at 1.90 a resolution
34d1rv3a_
not modelled 9.8 20 Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
35d2nqwa1
not modelled 9.7 8 Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CorC/HlyC domain-like
36d1lm5a_
not modelled 9.6 21 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Plakin repeat
Family:Plakin repeat
37c2fjtA_
not modelled 9.6 14 PDB header:lyase
Chain: A: PDB Molecule:adenylyl cyclase class iv;
PDBTitle: adenylyl cyclase class iv from yersinia pestis
38d2duca1
not modelled 9.1 33 Fold:Trypsin-like serine proteases
Superfamily:Trypsin-like serine proteases
Family:Viral cysteine protease of trypsin fold
39d4ubpc1
not modelled 8.9 20 Fold:Composite domain of metallo-dependent hydrolases
Superfamily:Composite domain of metallo-dependent hydrolases
Family:alpha-Subunit of urease
40d2ddha1
not modelled 8.7 21 Fold:Bromodomain-like
Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like
Family:acyl-CoA oxidase C-terminal domains
41d1lvoa_
not modelled 8.7 20 Fold:Trypsin-like serine proteases
Superfamily:Trypsin-like serine proteases
Family:Viral cysteine protease of trypsin fold
42d2d8ca1
not modelled 8.2 33 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
43c2vwaE_
not modelled 8.1 15 PDB header:unknown function
Chain: E: PDB Molecule:putative uncharacterized protein pf13_0012;
PDBTitle: crystal structure of a sporozoite protein essential for2 liver stage development of malaria parasite
44c2vq5B_
not modelled 7.8 29 PDB header:lyase
Chain: B: PDB Molecule:s-norcoclaurine synthase;
PDBTitle: x-ray structure of norcoclaurine synthase from thalictrum2 flavum in complex with dopamine and hydroxybenzaldehyde
45c3d23A_
not modelled 7.5 35 PDB header:hydrolase
Chain: A: PDB Molecule:3c-like proteinase;
PDBTitle: main protease of hcov-hku1
46d2oaia1
not modelled 7.3 13 Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CorC/HlyC domain-like
47d2o1ra1
not modelled 7.3 14 Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CorC/HlyC domain-like
48d1ic8a2
not modelled 7.1 19 Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:POU-specific domain
49d1gm5a2
not modelled 7.1 13 Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:RecG "wedge" domain
50d1zrua3
not modelled 6.9 53 Fold:Pseudo beta-prism
Superfamily:Bacteriophage trimeric proteins domain
Family:Lactophage receptor-binding protein N-terminal domain
51c2d2pA_
not modelled 6.9 19 PDB header:hormone/growth factor
Chain: A: PDB Molecule:pituitary adenylate cyclase activating
PDBTitle: the solution structure of micelle-bound peptide
52d2p61a1
not modelled 6.8 20 Fold:Four-helical up-and-down bundle
Superfamily:TM1646-like
Family:TM1646-like
53c2p61A_
not modelled 6.7 20 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein tm_1646;
PDBTitle: crystal structure of protein tm1646 from thermotoga2 maritima, pfam duf327
54c2dc4A_
not modelled 6.6 20 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:165aa long hypothetical protein;
PDBTitle: structure of ph1012 protein from pyrococcus horikoshii ot3
55d2r25a1
not modelled 6.5 21 Fold:Four-helical up-and-down bundle
Superfamily:Histidine-containing phosphotransfer domain, HPT domain
Family:Phosphorelay protein-like
56c2qw6A_
not modelled 6.3 30 PDB header:hydrolase
Chain: A: PDB Molecule:aaa atpase, central region;
PDBTitle: crystal structure of the c-terminal domain of an aaa atpase from2 enterococcus faecium do
57d2qw6a1
not modelled 6.3 30 Fold:post-AAA+ oligomerization domain-like
Superfamily:post-AAA+ oligomerization domain-like
Family:MgsA/YrvN C-terminal domain-like
58c3llbA_
not modelled 6.2 20 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of the protein pa3983 with unknown2 function from pseudomonas aeruginosa pao1
59d1v5sa_
not modelled 6.1 14 Fold:TBP-like
Superfamily:KA1-like
Family:Kinase associated domain 1, KA1
60c3c7tB_
not modelled 6.1 27 PDB header:hydrolase
Chain: B: PDB Molecule:ecdysteroid-phosphate phosphatase;
PDBTitle: crystal structure of the ecdysone phosphate phosphatase, eppase, from2 bombix mori in complex with tungstate
61c2a7uA_
not modelled 6.0 15 PDB header:hydrolase
Chain: A: PDB Molecule:atp synthase alpha chain;
PDBTitle: nmr solution structure of the e.coli f-atpase delta subunit n-terminal2 domain in complex with alpha subunit n-terminal 22 residues
62d2p3ha1
not modelled 6.0 6 Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CorC/HlyC domain-like
63d1w07a1
not modelled 5.9 14 Fold:Bromodomain-like
Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like
Family:acyl-CoA oxidase C-terminal domains
64d2caza1
not modelled 5.9 29 Fold:Long alpha-hairpin
Superfamily:Endosomal sorting complex assembly domain
Family:VPS23 C-terminal domain
65d1ef5a_
not modelled 5.9 25 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ras-binding domain, RBD
66c3vejB_
not modelled 5.8 40 PDB header:protein binding
Chain: B: PDB Molecule:ubiquitin-like protein mdy2;
PDBTitle: crystal structure of the get5 carboxyl domain from s. cerevisiae
67c3dedB_
not modelled 5.8 13 PDB header:membrane protein
Chain: B: PDB Molecule:probable hemolysin;
PDBTitle: c-terminal domain of probable hemolysin from chromobacterium violaceum
68d2gx8a1
not modelled 5.7 20 Fold:NIF3 (NGG1p interacting factor 3)-like
Superfamily:NIF3 (NGG1p interacting factor 3)-like
Family:NIF3 (NGG1p interacting factor 3)-like
69c2cazD_
not modelled 5.7 29 PDB header:protein transport
Chain: D: PDB Molecule:suppressor protein stp22 of temperature-
PDBTitle: escrt-i core
70d3deda1
not modelled 5.6 13 Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CorC/HlyC domain-like
71d3ctda1
not modelled 5.6 23 Fold:post-AAA+ oligomerization domain-like
Superfamily:post-AAA+ oligomerization domain-like
Family:MgsA/YrvN C-terminal domain-like
72d2f6ma1
not modelled 5.6 29 Fold:Long alpha-hairpin
Superfamily:Endosomal sorting complex assembly domain
Family:VPS23 C-terminal domain
73d1y6xa1
not modelled 5.6 25 Fold:all-alpha NTP pyrophosphatases
Superfamily:all-alpha NTP pyrophosphatases
Family:HisE-like (PRA-PH)
74c2rmrA_
not modelled 5.6 12 PDB header:transcription
Chain: A: PDB Molecule:paired amphipathic helix protein sin3a;
PDBTitle: solution structure of msin3a pah1 domain
75d2plsa1
not modelled 5.6 13 Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CorC/HlyC domain-like
76c2a7wF_
not modelled 5.5 25 PDB header:hydrolase
Chain: F: PDB Molecule:phosphoribosyl-atp pyrophosphatase;
PDBTitle: crystal structure of phosphoribosyl-atp pyrophosphatase2 from chromobacterium violaceum (atcc 12472). nesg target3 cvr7
77d2a7wa1
not modelled 5.5 25 Fold:all-alpha NTP pyrophosphatases
Superfamily:all-alpha NTP pyrophosphatases
Family:HisE-like (PRA-PH)
78d1x4ta1
not modelled 5.5 10 Fold:Long alpha-hairpin
Superfamily:ISY1 domain-like
Family:ISY1 N-terminal domain-like
79c3myfB_
not modelled 5.5 10 PDB header:transferase
Chain: B: PDB Molecule:sensor protein;
PDBTitle: the crystal structure of the hpt domain from the hpt sensor hybrid2 histidine kinase from shewanella to 1.80a
80c3qflA_
not modelled 5.3 24 PDB header:protein binding
Chain: A: PDB Molecule:mla10;
PDBTitle: coiled-coil domain-dependent homodimerization of intracellular mla2 immune receptors defines a minimal functional module for triggering3 cell death
81d1p9sa_
not modelled 5.2 33 Fold:Trypsin-like serine proteases
Superfamily:Trypsin-like serine proteases
Family:Viral cysteine protease of trypsin fold
82c3k44D_
not modelled 5.2 21 PDB header:nucleic acid binding protein
Chain: D: PDB Molecule:purine-rich binding protein-alpha, isoform b;
PDBTitle: crystal structure of drosophila melanogaster pur-alpha
83d1yxba1
not modelled 5.2 13 Fold:all-alpha NTP pyrophosphatases
Superfamily:all-alpha NTP pyrophosphatases
Family:HisE-like (PRA-PH)
84c3kjxD_
not modelled 5.2 12 PDB header:transcription regulator
Chain: D: PDB Molecule:transcriptional regulator, laci family;
PDBTitle: crystal structure of a transcriptional regulator, lacl2 family protein from silicibacter pomeroyi
85c3iqtA_
not modelled 5.2 12 PDB header:transferase
Chain: A: PDB Molecule:signal transduction histidine-protein kinase bara;
PDBTitle: structure of the hpt domain of sensor protein bara from escherichia2 coli cft073.
86c3pl9A_
not modelled 5.2 16 PDB header:photosynthesis
Chain: A: PDB Molecule:chlorophyll a-b binding protein;
PDBTitle: crystal structure of spinach minor light-harvesting complex cp29 at2 2.80 angstrom resolution
87d1y4oa1
not modelled 5.1 25 Fold:Profilin-like
Superfamily:Roadblock/LC7 domain
Family:Roadblock/LC7 domain
88c2gx8B_
not modelled 5.1 20 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:nif3-related protein;
PDBTitle: the crystal stucture of bacillus cereus protein related to nif3
89d2o3ga1
not modelled 5.1 13 Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CorC/HlyC domain-like
90d1nmpa_
not modelled 5.0 15 Fold:NIF3 (NGG1p interacting factor 3)-like
Superfamily:NIF3 (NGG1p interacting factor 3)-like
Family:NIF3 (NGG1p interacting factor 3)-like
91d1yvwa1
not modelled 5.0 19 Fold:all-alpha NTP pyrophosphatases
Superfamily:all-alpha NTP pyrophosphatases
Family:HisE-like (PRA-PH)

Binding site prediction 

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If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite