Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionQ8N427
DateWed Jun 6 09:55:08 BST 2012
Unique Job ID7fd6079845d00443

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c3ztqC_
Top template information
PDB header:transferase
Chain: C: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: hexagonal crystal form p61 of the aquifex aeolicus nucleoside2 diphosphate kinase
Confidence and coverage
Confidence:100.0% Coverage: 23%
136 residues ( 23% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
470 residues ( 80%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MASKKREVQLQTVINNQSLWDEMLQNKGLTVIDVYQAWCGPCRAMQPLFRKLKNELNEDE
Secondary structure 
SS confidence 
Disorder  ???????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  ILHFAVAEADNIVTLQPFRDKCEPVFLFSVNGKIIEKIQGANAPLVNKKVINLIDEERKI
Secondary structure 
SS confidence 
Disorder 
?
?????
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  AAGEMARPQYPEIPLVDSDSEVSEESPCESVQELYSIAIIKPDAVISKKVLEIKRKITKA
Secondary structure 
SS confidence 
Disorder  ???????????????????
?
??
?
??
?
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  GFIIEAEHKTVLTEEQVVNFYSRIADQCDFEEFVSFMTSGLSYILVVSQGSKHNPPSEET
Secondary structure 
SS confidence 
Disorder 
????
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  EPQTDTEPNERSEDQPEVEAQVTPGMMKNKQDSLQEYLERQHLAQLCDIEEDAANVAKFM
Secondary structure 
SS confidence 
Disorder 
?
????
????????
???????
Disorder confidence 
 
   .........310.........320.........330.........340.........350.........360
Sequence  DAFFPDFKKMKSMKLEKTLALLRPNLFHERKDDVLRIIKDEDFKILEQRQVVLSEKEAQA
Secondary structure 
SS confidence 
Disorder 
???
Disorder confidence 
 
   .........370.........380.........390.........400.........410.........420
Sequence  LCKEYENEDYFNKLIENMTSGPSLALVLLRDNGLQYWKQLLGPRTVEEAIEYFPESLCAQ
Secondary structure 
SS confidence 
Disorder 
???
???
Disorder confidence 
 
   .........430.........440.........450.........460.........470.........480
Sequence  FAMDSLPVNQLYGSDSLETAEREIQHFFPLQSTLGLIKPHATSEQREQILKIVKEAGFDL
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........490.........500.........510.........520.........530.........540
Sequence  TQVKKMFLTPEQIEKIYPKVTGKDFYKDLLEMLSVGPSMVMILTKWNAVAEWRRLMGPTD
Secondary structure 
SS confidence 
Disorder 
???
Disorder confidence 
 
   .........550.........560.........570.........580........
Sequence  PEEAKLLSPDSIRAQFGISKLKNIVHGASNAYEAKEVVNRLFEDPEEN
Secondary structure 
SS confidence 
Disorder 
?
??????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3ztq chain C

3D model

Region: 451 - 586
Aligned: 136
Modelled: 136
Confidence: 100.0%
Identity: 33%
PDB header:transferase
Chain: C: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: hexagonal crystal form p61 of the aquifex aeolicus nucleoside2 diphosphate kinase

Phyre2

PDB 1xqi chain A domain 1

3D model

Region: 449 - 586
Aligned: 135
Modelled: 138
Confidence: 100.0%
Identity: 33%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 1ucn chain A

3D model

Region: 449 - 586
Aligned: 135
Modelled: 138
Confidence: 100.0%
Identity: 25%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 3mpd chain A

3D model

Region: 450 - 585
Aligned: 133
Modelled: 136
Confidence: 100.0%
Identity: 28%
PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: crystal structure of nucleoside diphosphate kinase from2 encephalitozoon cuniculi, cubic form, apo

Phyre2

PDB 1u8w chain A

3D model

Region: 450 - 588
Aligned: 136
Modelled: 136
Confidence: 100.0%
Identity: 26%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 1hlw chain A

3D model

Region: 449 - 586
Aligned: 135
Modelled: 138
Confidence: 100.0%
Identity: 25%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 3bbb chain A domain 1

3D model

Region: 449 - 586
Aligned: 135
Modelled: 138
Confidence: 100.0%
Identity: 27%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 1ehw chain A

3D model

Region: 451 - 586
Aligned: 133
Modelled: 136
Confidence: 100.0%
Identity: 26%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 1xiq chain A

3D model

Region: 450 - 586
Aligned: 134
Modelled: 136
Confidence: 100.0%
Identity: 26%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 1be4 chain A

3D model

Region: 449 - 586
Aligned: 135
Modelled: 138
Confidence: 100.0%
Identity: 27%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 1w7w chain A

3D model

Region: 449 - 586
Aligned: 135
Modelled: 138
Confidence: 100.0%
Identity: 27%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 1s57 chain A

3D model

Region: 449 - 586
Aligned: 135
Modelled: 138
Confidence: 100.0%
Identity: 28%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 2hur chain F

3D model

Region: 450 - 586
Aligned: 134
Modelled: 138
Confidence: 100.0%
Identity: 33%
PDB header:signaling protein,transferase
Chain: F: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: escherichia coli nucleoside diphosphate kinase

Phyre2

PDB 3ngt chain J

3D model

Region: 451 - 586
Aligned: 133
Modelled: 136
Confidence: 100.0%
Identity: 26%
PDB header:transferase
Chain: J: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: structure of leishmania ndkb complexed with amp.

Phyre2

PDB 3js9 chain A

3D model

Region: 450 - 586
Aligned: 134
Modelled: 134
Confidence: 100.0%
Identity: 31%
PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate kinase family protein;
PDBTitle: crystal structure of nucleoside diphosphate kinase family protein from2 babesia bovis

Phyre2

PDB 1w7w chain F

3D model

Region: 449 - 586
Aligned: 135
Modelled: 134
Confidence: 100.0%
Identity: 27%
PDB header:transferase
Chain: F: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: structure and mutational analysis of a plant mitochondrial2 nucleoside diphosphate kinase: identification of residues3 involved in serine phosphorylation and oligomerization.

Phyre2

PDB 1wkj chain A domain 1

3D model

Region: 450 - 586
Aligned: 134
Modelled: 137
Confidence: 100.0%
Identity: 31%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 1nb2 chain A

3D model

Region: 450 - 586
Aligned: 134
Modelled: 137
Confidence: 100.0%
Identity: 27%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 1k44 chain A

3D model

Region: 451 - 585
Aligned: 133
Modelled: 135
Confidence: 100.0%
Identity: 29%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 1pku chain A domain 1

3D model

Region: 450 - 584
Aligned: 132
Modelled: 135
Confidence: 100.0%
Identity: 27%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 4di6 chain F

3D model

Region: 312 - 465
Aligned: 151
Modelled: 151
Confidence: 100.0%
Identity: 22%
PDB header:transferase
Chain: F: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: crystal structure of nucleoside-diphosphate kinase from borrelia2 burgdorferi

Phyre2

PDB 2diy chain A

3D model

Region: 1 - 115
Aligned: 113
Modelled: 113
Confidence: 99.8%
Identity: 24%
PDB header:protein binding
Chain: A: PDB Molecule:thioredoxin-like protein 2;
PDBTitle: the solution structure of the thioredoxin domain of human2 thioredoxin-like protein 2

Phyre2

PDB 1xfl chain A

3D model

Region: 1 - 114
Aligned: 109
Modelled: 109
Confidence: 99.8%
Identity: 29%
Fold: Thioredoxin fold
Superfamily: Thioredoxin-like
Family: Thioltransferase

Phyre2

PDB 3d22 chain A

3D model

Region: 12 - 115
Aligned: 102
Modelled: 102
Confidence: 99.8%
Identity: 24%
PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin h-type;
PDBTitle: crystal structure of a poplar thioredoxin h mutant,2 pttrxh4c61s

Phyre2

PDB 1r26 chain A

3D model

Region: 12 - 116
Aligned: 103
Modelled: 103
Confidence: 99.8%
Identity: 21%
Fold: Thioredoxin fold
Superfamily: Thioredoxin-like
Family: Thioltransferase

Phyre2

PDB 1gh2 chain A

3D model

Region: 12 - 115
Aligned: 101
Modelled: 101
Confidence: 99.8%
Identity: 21%
Fold: Thioredoxin fold
Superfamily: Thioredoxin-like
Family: Thioltransferase

Phyre2

PDB 2ifq chain A domain 1

3D model

Region: 12 - 114
Aligned: 100
Modelled: 100
Confidence: 99.8%
Identity: 26%
Fold: Thioredoxin fold
Superfamily: Thioredoxin-like
Family: Thioltransferase

Phyre2

PDB 3dxb chain E

3D model

Region: 11 - 209
Aligned: 183
Modelled: 183
Confidence: 99.7%
Identity: 17%
PDB header:splicing, transcription
Chain: E: PDB Molecule:thioredoxin n-terminally fused to puf60(uhm);
PDBTitle: structure of the uhm domain of puf60 fused to thioredoxin

Phyre2
1
c3ztqC_
2
d1xqia1
3
d1ucna_
4
c3mpdA_
5
d1u8wa_
6
d1hlwa_
7
d3bbba1
8
d1ehwa_
9
d1xiqa_
10
d1be4a_
11
d1w7wa_
12
d1s57a_
13
c2hurF_
14
c3ngtJ_
15
c3js9A_
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c1w7wF_
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d1wkja1
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d1nb2a_
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d1k44a_
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d1pkua1
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c4di6F_
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c2diyA_
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d1xfla_
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c3d22A_
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d1r26a_
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d1gh2a_
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d2ifqa1
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c3dxbE_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3ztqC_
100.0 33 PDB header:transferase
Chain: C: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: hexagonal crystal form p61 of the aquifex aeolicus nucleoside2 diphosphate kinase
2d1xqia1
100.0 33 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
3d1ucna_
100.0 25 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
4c3mpdA_
100.0 28 PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: crystal structure of nucleoside diphosphate kinase from2 encephalitozoon cuniculi, cubic form, apo
5d1u8wa_
100.0 26 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
6d1hlwa_
100.0 25 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
7d3bbba1
100.0 27 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
8d1ehwa_
100.0 26 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
9d1xiqa_
100.0 26 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
10d1be4a_
100.0 27 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
11d1w7wa_
100.0 27 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
12d1s57a_
100.0 28 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
13c2hurF_
100.0 33 PDB header:signaling protein,transferase
Chain: F: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: escherichia coli nucleoside diphosphate kinase
14c3ngtJ_
100.0 26 PDB header:transferase
Chain: J: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: structure of leishmania ndkb complexed with amp.
15c3js9A_
100.0 31 PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate kinase family protein;
PDBTitle: crystal structure of nucleoside diphosphate kinase family protein from2 babesia bovis
16c1w7wF_
100.0 27 PDB header:transferase
Chain: F: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: structure and mutational analysis of a plant mitochondrial2 nucleoside diphosphate kinase: identification of residues3 involved in serine phosphorylation and oligomerization.
17d1wkja1
100.0 31 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
18d1nb2a_
100.0 27 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
19d1k44a_
100.0 29 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
20d1pkua1
100.0 27 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
21d2az3a1
not modelled 100.0 26 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
22c3q89H_
not modelled 100.0 31 PDB header:transferase
Chain: H: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: crystal structure of staphylococcus aureus nucleoside diphosphate2 kinase complexed with cdp
23c2vu5A_
not modelled 100.0 30 PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: crystal structure of pndk from bacillus anthracis
24d1zs6a1
not modelled 100.0 26 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
25d1nhkl_
not modelled 100.0 32 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
26c4di6F_
100.0 22 PDB header:transferase
Chain: F: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: crystal structure of nucleoside-diphosphate kinase from borrelia2 burgdorferi
27c4dutA_
not modelled 100.0 33 PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: the structure of nucleoside diphosphate kinase (ndk) from burkholderia2 thailandensis
28d2dyaa1
not modelled 100.0 29 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
29d1nsqa_
not modelled 100.0 26 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
30d2b8qa1
not modelled 100.0 23 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
31c2az1B_
not modelled 100.0 26 PDB header:transferase
Chain: B: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: structure of a halophilic nucleoside diphosphate kinase2 from halobacterium salinarum
32c3b6bF_
not modelled 100.0 24 PDB header:transferase
Chain: F: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: crystal structure of acanthamoeba polyphaga mimivirus2 nucleoside diphosphate kinase complexed with dgdp
33c3b54A_
not modelled 100.0 24 PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: saccharomyces cerevisiae nucleoside diphosphate kinase
34c3r9lA_
not modelled 100.0 36 PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: crystal structure of nucleoside diphosphate kinase from giardia2 lamblia featuring a disordered dinucleotide binding site
35c2diyA_
99.8 24 PDB header:protein binding
Chain: A: PDB Molecule:thioredoxin-like protein 2;
PDBTitle: the solution structure of the thioredoxin domain of human2 thioredoxin-like protein 2
36d1xfla_
99.8 29 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
37c3d22A_
99.8 24 PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin h-type;
PDBTitle: crystal structure of a poplar thioredoxin h mutant,2 pttrxh4c61s
38d1r26a_
99.8 21 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
39d1gh2a_
99.8 21 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
40d2ifqa1
99.8 26 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
41d1ep7a_
not modelled 99.8 25 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
42c2oe0B_
not modelled 99.8 27 PDB header:electron transport
Chain: B: PDB Molecule:thioredoxin-3;
PDBTitle: crystal structure of mitochondrial thioredoxin 3 from2 saccharomyces cerevisiae
43c3p2aB_
not modelled 99.8 23 PDB header:oxidoreductase
Chain: B: PDB Molecule:putative thioredoxin-like protein;
PDBTitle: crystal structure of thioredoxin 2 from yersinia pestis
44d1syra_
not modelled 99.8 18 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
45c2j23A_
not modelled 99.7 24 PDB header:immune protein
Chain: A: PDB Molecule:thioredoxin;
PDBTitle: cross-reactivity and crystal structure of malassezia2 sympodialis thioredoxin (mala s 13), a member of a new pan-3 allergen family
46d1ti3a_
not modelled 99.7 22 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
47c2xbqB_
not modelled 99.7 25 PDB header:oxidoreductase
Chain: B: PDB Molecule:thioredoxin;
PDBTitle: crystal structure of reduced schistosoma mansoni2 thioredoxin pre-protein at 1.7 angstrom
48c2wz9A_
not modelled 99.7 27 PDB header:protein binding
Chain: A: PDB Molecule:glutaredoxin-3;
PDBTitle: crystal structure of the thioredoxin domain of human txnl2
49d1xwaa_
not modelled 99.7 25 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
50c2pptA_
not modelled 99.7 20 PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin-2;
PDBTitle: crystal structure of thioredoxin-2
51c2vlvA_
not modelled 99.7 31 PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin h isoform 2.;
PDBTitle: crystal structure of barley thioredoxin h isoform 2 in2 partially radiation-reduced state
52c3p2aA_
not modelled 99.7 23 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative thioredoxin-like protein;
PDBTitle: crystal structure of thioredoxin 2 from yersinia pestis
53d1f9ma_
not modelled 99.7 23 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
54c2vm2C_
not modelled 99.7 21 PDB header:oxidoreductase
Chain: C: PDB Molecule:thioredoxin h isoform 1.;
PDBTitle: crystal structure of barley thioredoxin h isoform 12 crystallized using peg as precipitant
55c2vimA_
not modelled 99.7 25 PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin;
PDBTitle: x-ray structure of fasciola hepatica thioredoxin
56c3d6iB_
not modelled 99.7 19 PDB header:oxidoreductase
Chain: B: PDB Molecule:monothiol glutaredoxin-3;
PDBTitle: structure of the thioredoxin-like domain of yeast2 glutaredoxin 3
57c2i9hA_
not modelled 99.7 27 PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin i;
PDBTitle: nmr solution structure of the reduced form of thioredoxin 12 from yeast (trx1)
58c3tcoA_
not modelled 99.7 22 PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin (trxa-1);
PDBTitle: crystallographic and spectroscopic characterization of sulfolobus2 solfataricus trxa1 provide insights into the determinants of3 thioredoxin fold stability
59c3cxgA_
not modelled 99.7 21 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative thioredoxin;
PDBTitle: crystal structure of plasmodium falciparum thioredoxin, pfi0790w
60c1w89E_
not modelled 99.7 20 PDB header:electron transport
Chain: E: PDB Molecule:thioredoxin;
PDBTitle: structure of the reduced form of human thioredoxin 2
61c3hz4A_
not modelled 99.7 15 PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin;
PDBTitle: crystal structure of thioredoxin from methanosarcina mazei
62c1xbsA_
not modelled 99.7 12 PDB header:transcription, cell cycle
Chain: A: PDB Molecule:dim1-like protein;
PDBTitle: crystal structure of human dim2: a dim1-like protein
63c3dxbE_
99.7 17 PDB header:splicing, transcription
Chain: E: PDB Molecule:thioredoxin n-terminally fused to puf60(uhm);
PDBTitle: structure of the uhm domain of puf60 fused to thioredoxin
64c3qdnA_
not modelled 99.7 15 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative thioredoxin protein;
PDBTitle: putative thioredoxin protein from salmonella typhimurium
65d1qgva_
not modelled 99.7 13 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:spliceosomal protein U5-15Kd
66d1thxa_
not modelled 99.6 17 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
67d2trxa_
not modelled 99.6 20 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
68c2f51B_
not modelled 99.6 17 PDB header:electron transport
Chain: B: PDB Molecule:thioredoxin;
PDBTitle: structure of trichomonas vaginalis thioredoxin
69c2l6dA_
not modelled 99.6 11 PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin;
PDBTitle: solution structure of desulfothioredoxin from desulfovibrio vulgaris2 hildenborough in its reduced form
70d1m7ta_
not modelled 99.6 22 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
71c2l5lA_
not modelled 99.6 20 PDB header:transport protein
Chain: A: PDB Molecule:thioredoxin;
PDBTitle: solution structure of thioredoxin from bacteroides vulgatus
72c2i4aA_
not modelled 99.6 24 PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin;
PDBTitle: crystal structure of thioredoxin from the acidophile2 acetobacter aceti
73c2yzuA_
not modelled 99.6 23 PDB header:electron transport
Chain: A: PDB Molecule:thioredoxin;
PDBTitle: crystal structure of oxidized thioredoxin from thermus thermophilus2 hb8
74c2dj0A_
not modelled 99.6 15 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:thioredoxin-related transmembrane protein 2;
PDBTitle: the solution structure of the thioredoxin domain of human2 thioredoxin-related transmembrane protein 2
75c2e0qA_
not modelled 99.6 19 PDB header:electron transport
Chain: A: PDB Molecule:thioredoxin;
PDBTitle: crystal structure of k53e thioredoxin from sulfolobus2 tokodaii strain7
76c2i1uA_
not modelled 99.6 19 PDB header:electron transport
Chain: A: PDB Molecule:thioredoxin;
PDBTitle: mycobacterium tuberculosis thioredoxin c
77c3hypB_
not modelled 99.6 17 PDB header:electron transport
Chain: B: PDB Molecule:thioredoxin;
PDBTitle: crystal structure of bacteroides fragilis trxp_s105g mutant
78c3gnjD_
not modelled 99.6 17 PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:thioredoxin domain protein;
PDBTitle: the crystal structure of a thioredoxin-related protein from2 desulfitobacterium hafniense dcb
79c1t00A_
not modelled 99.6 22 PDB header:electron transport
Chain: A: PDB Molecule:thioredoxin;
PDBTitle: the structure of thioredoxin from s. coelicolor
80c3ul3A_
not modelled 99.6 14 PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin;
PDBTitle: structural insights into thioredoxin-2: a component of malaria2 parasite protein secretion machinery
81d1dbya_
not modelled 99.6 21 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
82c2dj1A_
not modelled 99.6 18 PDB header:isomerase
Chain: A: PDB Molecule:protein disulfide-isomerase a4;
PDBTitle: the solution structure of the first thioredoxin domain of2 mouse protein disulfide-isomerase a4
83d1nw2a_
not modelled 99.6 18 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
84c3emxB_
not modelled 99.6 16 PDB header:oxidoreductase
Chain: B: PDB Molecule:thioredoxin;
PDBTitle: crystal structure of thioredoxin from aeropyrum pernix
85c2dbcA_
not modelled 99.6 15 PDB header:signaling protein
Chain: A: PDB Molecule:unnamed protein product;
PDBTitle: solution structure of the thioredoxin-like domain of2 phosducin-like protein 2(pdcl2)
86d1fb6a_
not modelled 99.6 22 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
87c2dizA_
not modelled 99.6 18 PDB header:electron transport
Chain: A: PDB Molecule:thioredoxin domain-containing protein 5;
PDBTitle: the solution structure of the third thioredoxin domain of2 human thioredoxin domain-containing protein 5
88c2vocA_
not modelled 99.6 18 PDB header:electron transport
Chain: A: PDB Molecule:thioredoxin;
PDBTitle: thioredoxin a active site mutants form mixed disulfide2 dimers that resemble enzyme-substrate reaction3 intermediate
89c1v98A_
not modelled 99.6 21 PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin;
PDBTitle: crystal structure analysis of thioredoxin from thermus thermophilus
90c2o7kA_
not modelled 99.6 18 PDB header:electron transport
Chain: A: PDB Molecule:thioredoxin;
PDBTitle: s. aureus thioredoxin
91c2yj7A_
not modelled 99.6 19 PDB header:oxidoreductase
Chain: A: PDB Molecule:lpbca thioredoxin;
PDBTitle: crystal structure of a hyperstable protein from the precambrian2 period
92c2albA_
not modelled 99.5 14 PDB header:isomerase
Chain: A: PDB Molecule:protein disulfide-isomerase a3;
PDBTitle: nmr structure of the n-terminal domain a of the2 glycoprotein chaperone erp57
93c2r2jA_
not modelled 99.5 19 PDB header:chaperone
Chain: A: PDB Molecule:thioredoxin domain-containing protein 4;
PDBTitle: crystal structure of human erp44
94c1x5dA_
not modelled 99.5 15 PDB header:isomerase
Chain: A: PDB Molecule:protein disulfide-isomerase a6;
PDBTitle: the solution structure of the second thioredoxin-like2 domain of human protein disulfide-isomerase a6
95c2dj2A_
not modelled 99.5 18 PDB header:isomerase
Chain: A: PDB Molecule:protein disulfide-isomerase a4;
PDBTitle: the solution structure of the second thioredoxin domain of2 mouse protein disulfide-isomerase a4
96d1j08a2
not modelled 99.5 16 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:PDI-like
97c1b9xC_
not modelled 99.5 17 PDB header:signaling protein
Chain: C: PDB Molecule:protein (phosducin);
PDBTitle: structural analysis of phosducin and its phosphorylation-2 regulated interaction with transducin
98d1a8la2
not modelled 99.5 14 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:PDI-like
99c1a8yA_
not modelled 99.5 11 PDB header:calcium-binding protein
Chain: A: PDB Molecule:calsequestrin;
PDBTitle: crystal structure of calsequestrin from rabbit skeletal muscle2 sarcoplasmic reticulum at 2.4 a resolution
100c4euyA_
not modelled 99.5 13 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of thioredoxin-like protein bce_0499 from bacillus2 cereus atcc 10987
101c1x5eA_
not modelled 99.5 14 PDB header:electron transport
Chain: A: PDB Molecule:thioredoxin domain containing protein 1;
PDBTitle: the solution structure of the thioredoxin-like domain of2 human thioredoxin-related transmembrane protein
102d2trcp_
not modelled 99.5 17 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Phosducin
103c2vafA_
not modelled 99.5 13 PDB header:metal-binding protein
Chain: A: PDB Molecule:calsequestrin-2;
PDBTitle: crystal structure of human cardiac calsequestrin
104c3ed3A_
not modelled 99.4 13 PDB header:isomerase
Chain: A: PDB Molecule:protein disulfide-isomerase mpd1;
PDBTitle: crystal structure of the yeast dithiol/disulfide2 oxidoreductase mpd1p
105d1woua_
not modelled 99.4 13 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Txnl5-like
106c3apsA_
not modelled 99.4 21 PDB header:oxidoreductase
Chain: A: PDB Molecule:dnaj homolog subfamily c member 10;
PDBTitle: crystal structure of trx4 domain of erdj5
107d1zmaa1
not modelled 99.4 14 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
108c3q6oA_
not modelled 99.4 14 PDB header:oxidoreductase
Chain: A: PDB Molecule:sulfhydryl oxidase 1;
PDBTitle: oxidoreductase fragment of human qsox1
109c2qsiB_
not modelled 99.4 13 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative hydrogenase expression/formation protein hupg;
PDBTitle: crystal structure of putative hydrogenase expression/formation protein2 hupg from rhodopseudomonas palustris cga009
110d1v9wa_
not modelled 99.4 15 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Txnl5-like
111d2b5ea4
not modelled 99.4 19 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:PDI-like
112c3idvA_
not modelled 99.4 20 PDB header:isomerase
Chain: A: PDB Molecule:protein disulfide-isomerase a4;
PDBTitle: crystal structure of the a0a fragment of erp72
113d1oaza_
not modelled 99.4 20 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
114c2l57A_
not modelled 99.4 20 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of an uncharacterized thioredoin-like protein from2 clostridium perfringens
115d1a0rp_
not modelled 99.4 16 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Phosducin
116c2b5eA_
not modelled 99.4 20 PDB header:isomerase
Chain: A: PDB Molecule:protein disulfide-isomerase;
PDBTitle: crystal structure of yeast protein disulfide isomerase
117d1a8ya1
not modelled 99.4 12 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Calsequestrin
118c3apoA_
not modelled 99.4 13 PDB header:oxidoreductase
Chain: A: PDB Molecule:dnaj homolog subfamily c member 10;
PDBTitle: crystal structure of full-length erdj5
119c3f8uA_
not modelled 99.4 14 PDB header:immune system/isomerase
Chain: A: PDB Molecule:protein disulfide-isomerase a3erp57;
PDBTitle: tapasin/erp57 heterodimer
120c2qc7A_
not modelled 99.4 9 PDB header:chaperone
Chain: A: PDB Molecule:endoplasmic reticulum protein erp29;
PDBTitle: crystal structure of the protein-disulfide isomerase related chaperone2 erp29

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