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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3ngtJ_

Fold library idPDB HeaderMoleculeTitle
c3ngtJ_PDB header: transferaseChain: J: PDB Molecule: nucleoside diphosphate kinase;PDBTitle: structure of leishmania ndkb complexed with amp.


Added to library: Sat Apr 30 08:52:45 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SERTFIAVKPDGVQRGLVGEIIARFERKGYKLVALKILQPTTEQAQGHYKDLCSKPFFPALVKYFSSGPI
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Known secondary structure (DSSP)


TT
TT



TGGGTTSTTTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VCMVWEGKNVVKSGRVLLGATNPADSQPGTIRGDFAVDVGRNVCHGSDSVESAEREIAFWFKADEIASWT
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Known secondary structure (DSSP) STT

SSGGG

TTS


GGG



SS

GGGS



 ........
Sequence SHSVSQIY
Predicted secondary structure







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Known secondary structure (DSSP)
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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