Return to main results Retrieve Phyre Job Id

Job DescriptionQ02885
Confidence2.50%DateThu Jan 5 12:33:21 GMT 2012
Rank89Aligned Residues29
% Identity24%Templatec2ld7A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:histone deacetylase complex subunit sap30; PDBTitle: solution structure of the msin3a pah3-sap30 sid complex
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70.........80......
Predicted Secondary structure 



Query SS confidence 




























Query Sequence  LSRGVDTQFRHINIAEADHFKQFLRQIKR
Query Conservation 

 


 

 



 







 
 
  
Alig confidence 




























Template Conservation 
  

 


 
  


 


  

  

 
Template Sequence  LVEIVGCHFKSIPVNEKDTLTCFIYSVRN
Template Known Secondary structure  TT



Template Predicted Secondary structure 






Template SS confidence 




























   178.180.........190.........200......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions