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Job DescriptionP09394
Confidence100.00%DateThu Jan 5 11:02:21 GMT 2012
Rank13Aligned Residues217
% Identity21%Templated1vd6a1
SCOP infoTIM beta/alpha-barrel PLC-like phosphodiesterases Glycerophosphoryl diester phosphodiesterase
Resolution1.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........110
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Query Sequence  KIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLD
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Template Sequence  PLRLGHRGAPLKAKENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDPDTPLGP. . . . . . . . . . . . . . . . . VFQVDYA
Template Known Secondary structure 
TS
TTTS
TTSTT
S
TTS

S
STT.................GGGS
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   8.10.........20.........30.........40.........50.........60... ......70
 
   111........120.........130.........140.........150.........160.........170.........180.........190
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Query Sequence  EIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTL
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Template Sequence  DLKAQ. . . . . . . . . . . . . . . . . . . . . . . . . . EPDLPRLEEVLALKEAFP. . . . . QAVFNVELKS. . . . . . FPGLGEEAAR
Template Known Secondary structure  ..........................STT

BGGGGT
T.....T


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TTS
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   71.... ....80.........90... ......100... ......110...
 
   191........200.........210.........220.........230.........240.........250.........260.........270
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Query Sequence  EVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQV
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Template Sequence  RLAALLRG. . . REGVWVSSFDPLALLALRKAAP. . . . . GLPLGFLMAEDHSALLPC. . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTT...
SSS

T.....TS
SS

GGGGGG........................
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   114.....120. ........130.........140... ......150.........160.
 
   271........280.........290.........300.........310.........320.........330.........340.........350
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Query Sequence  AEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDK
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Template Sequence  . . . . . . . . . . . . LGVEAVHPHHALVTEEAVAGWRKRGLFVVAWTVNEEGEARR. . . . . . . . . . . LLALGLDGLIGDRPEV
Template Known Secondary structure  ............S

SBGGG

TT




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   162.......170.........180.........190.........200.. .......210........
 
   351.....
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Query Sequence  AVKFLN
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Template Conservation        
Template Sequence  LLPLGG
Template Known Secondary structure  TTS

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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