Return to main results Retrieve Phyre Job Id

Job DescriptionP09394
Confidence72.55%DateThu Jan 5 11:02:21 GMT 2012
Rank52Aligned Residues81
% Identity10%Templated1gcya2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   203......210... ......220.........230.........240...... ...250.........260.........270
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Query Sequence  DKVYLQCFDAD. . . . . . . . ELKRIKNELEPKMGMELNLVQLIAYTDWNETQQ. . . . KQPDGSWVNYNYDWMFKPGAMKQV
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Template Sequence  DEIILQGFHWNVVREAPNDWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSKSGGGEGYFWHDFNKNGRYGSDAQLRQ.
Template Known Secondary structure 





TTSTTTTT
S


S




B


B

SSTT
SSS
S
SSS

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   16...20.........30.........40.........50.........60.........70.........80.........90....
 
   271........280.........290.........300.........310..
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Query Sequence  AEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHP
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . AASALGGAGVKVLY
Template Known Secondary structure  ............................TT
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   98.100.........110.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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