Job Description P09394 Confidence 100.00% Date Thu Jan 5 11:02:21 GMT 2012 Rank 3 Aligned Residues 284 % Identity 20% Template c3l12A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of putative glycerophosphoryl diester2 phosphodiesterase (yp_165505.1) from silicibacter pomeroyi dss-3 at3 1.60 a resolution Resolution 1.60 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	D	S	N	E	K	I	V	I	A	H	R	G	A	S	G	Y	L	P	E	H	T	L	P	A	K	A	M	A	Y	A	Q	G	A	D	Y	L	E	Q	D	L	V	M	T	K	D	D	N	L	V	V	L	H	D	H	Y	L	D	R	V	T	D	V	A	D	R	F	P	D	R	A	R	K	D	G	R	Y	Y	A
Query Conservation
Alig confidence																																																																											.	.
Template Conservation																																																																											.	.
Template Sequence		R	G	H	P	S	V	V	R	V	I	G	H	R	G	A	R	G	V	X	P	E	N	T	L	E	G	F	A	F	T	L	A	A	G	V	R	A	L	E	F	D	V	V	X	T	A	D	G	V	P	V	V	T	H	N	H	H	L	A	N	A	X	T	R	D	G	Q	G	H	W	L	T	G	.	.	A	E	R	Q	V
Template Known Secondary structure				B	T	T	B							T	T	T	T	T	T	S		T	T											T	T												T	T	S						S	S	S	B			T	T	T		B		T	T	S		B			S	.	.	S			B	G
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	F	T	L	D	E	I	K	S	L	K	F	T	E	G	F	D	I	E	N	G	K	K	V	Q	T	Y	P	G	R	F	P	M	G	K	S	D	F	R	V	H	T	F	E	E	E	I	E	F	V	Q	G	L	N	H	S	T	G	K	N	I	G	I	Y	P	E	I	K	A	P	W	F	H	H	Q	E	G	K	D
Query Conservation
Alig confidence																																.	.	.	.																								.	.	.
Template Conservation																																.	.	.	.																								.	.	.
Template Sequence		A	E	X	T	Y	A	E	I	R	A	L	D	V	G	G	L	D	G	R	T	V	Y	G	R	R	F	P	D	Q	A	.	.	.	.	F	L	T	G	I	H	V	P	R	L	G	E	L	L	D	L	C	A	G	Y	G	D	Q	.	.	.	A	P	Y	L	L	L	E	L	K	S	D	P	A	L	X	H	D	H	A	A
Template Known Secondary structure		G	G	S							T	S	B		S	S			T	T	S						S	T	T	S		.	.	.	.			S	S					B										T	T	G	G	G	.	.	.												G	G	G	T	T
Template Predicted Secondary structure																																.	.	.	.																								.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	A	K	T	L	E	V	L	K	K	Y	G	Y	T	G	K	D	D	K	V	Y	L	Q	C	F	D	A	D	E	L	K	R	I	K	N	E	L	E	P	K	M	G	M	E	L	N	L	V	Q	L	I	A	Y	T	D	W	N	E	T	Q	Q	K	Q	P	D	G	S	W	V	N	Y	N	Y	D	W	M	F	K	P
Query Conservation
Alig confidence																																									.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	E	X	V	A	A	V	L	A	D	V	R	R	Y	R	X	E	P	R	T	V	X	H	S	F	D	W	A	L	L	G	E	C	R	R	Q	A	P	.	.	.	.	.	D	L	P	T	S	Y	L	S	Q	L	P	E	G	P	D	Y	D	R	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T	T		G	G	G						S													T	.	.	.	.	.	T	S														T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200						.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	M	K	Q	V	A	E	Y	A	D	G	I	G	P	D	Y	H	M	L	I	E	E	T	S	Q	P	G	N	I	K	L	T	G	M	V	Q	D	A	Q	Q	N	K	L	V	V	H	P	Y	T	V	R	S	D	K	L	P	E	Y	T	P	D	V	N	Q	L	Y	D	A	L	Y	N	K	A	G	V	N	G	L	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	T	E	S	L	P	Q	A	V	A	S	A	G	G	Q	L	W	C	P	Y	F	L	D	V	T	P	E	L	V	A	E	A	H	D	L	G	L	I	V	L	T	W	T	V	N	E	P	E	D	I	R	R	.	.	.	.	.	.	.	.	.	.	.	X	A	T	T	G	V	D	G	I	V
Template Known Secondary structure		.	.	.	.	.	.	.	.		S										T		S					B	G	G	G												T	T						B				S							.	.	.	.	.	.	.	.	.	.	.					T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.												.	.	.	.	.	.	290	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	F	P	D	K	A	V	K	F	L	N	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	Y	P	G	R	T	Q	R	I	L	I	D	X
Template Known Secondary structure			S												T
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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