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Job DescriptionP09394
Confidence85.09%DateThu Jan 5 11:02:21 GMT 2012
Rank35Aligned Residues79
% Identity10%Templatec2qpuB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:alpha-amylase type a isozyme; PDBTitle: sugar tongs mutant s378p in complex with acarbose
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   204.....210... ......220.........230.........240.........250.........260.........270......
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Query Sequence  KVYLQCFDAD. . . . . . . ELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADG
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Template Sequence  QVLFQGFNWESWKQSGGWYNMMMGKVDDIAAAGVTHVWLPPPSHSV. SNEGYMPGRLYDIDASKYGNAAELKS. . . . . . .
Template Known Secondary structure 




TTGGG
TT
GGGTT




S
BS.STTS
SB

TT
GGG
SS

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   2.......10.........20.........30.........40....... ..50.........60.........70...
 
   277..280.........290.........300.........310..
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Query Sequence  IGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHP
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . LIGALHGKGVQAIA
Template Known Secondary structure  ......................TT
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   74.....80.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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