Job Description P09394 Confidence 100.00% Date Thu Jan 5 11:02:21 GMT 2012 Rank 15 Aligned Residues 239 % Identity 23% Template c2o55A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative glycerophosphodiester phosphodiesterase; PDBTitle: crystal structure of a putative glycerophosphodiester2 phosphodiesterase from galdieria sulphuraria Resolution 2.81 Å

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		31	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure														.	.																																					.	.	.
Query SS confidence														.	.																																					.	.	.
Query Sequence		K	I	V	I	A	H	R	G	A	S	G	Y	.	.	L	P	E	H	T	L	P	A	K	A	M	A	Y	A	Q	G	A	D	Y	L	E	Q	D	L	V	M	T	K	D	D	N	L	V	V	L	H	.	.	.	D	H	Y	L	D	R	V	T	D	V	A	D	R	F	P	D	R	A	R	K	D	G	R	Y	Y	A	I
Query Conservation														.	.																																					.	.	.
Alig confidence														.	.																																					.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	K	I	V	G	H	R	G	V	G	K	E	G	L	A	P	E	N	T	L	R	S	F	V	L	C	X	E	R	N	I	P	Y	I	E	T	D	L	R	V	C	K	T	G	E	I	V	L	F	H	G	T	P	E	G	T	I	P	F	Y	K	D	.	.	.	.	.	.	.	.	.	.	.	.	G	T	S	R	I	G
Template Known Secondary structure								T	T	T	T	T	S	T	T	S		T	T											T	T												T	T	S								S	T	T	S	B		T	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	T	T		B	G	G
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70													.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	T	L	D	E	I	K	S	L	K	F	T	E	G	F	D	I	E	N	G	K	K	V	Q	T	Y	P	G	R	F	P	M	G	K	S	D	F	R	V	H	T	F	E	E	E	I	E	F	V	Q	G	L	N	H	S	T	G	K	N	I	G	I	Y	P	E	I	K	A	P	W	F	H	H	Q	E	G	K	D	I
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.													.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.													.
Template Sequence		D	L	S	L	E	E	L	K	R	L	D	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	H	T	I	P	S	L	E	E	L	F	V	A	I	E	E	.	.	.	.	Q	K	F	N	L	K	L	N	L	E	L	K	.	G	E	E	W	K	R	K	E	S	G	D
Template Known Secondary structure		G	S						T	T		B	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		B			B											.	.	.	.	S		S										.		S	S	S	S	S	T	T	S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.													.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.																							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	K	T	L	E	V	L	K	K	Y	G	Y	T	G	K	D	D	K	V	Y	L	Q	C	F	D	A	D	E	L	K	R	I	K	N	E	L	E	P	K	M	G	M	E	L	N	L	V	Q	L	I	A	Y	T	D	W	N	E	T	Q	Q	K	Q	P	D	G	S	W	V	N	Y	N	Y	D	W	M	F	K	P	G
Query Conservation
Alig confidence															.	.	.																							.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.																							.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	Q	R	L	L	L	L	V	E	K	Y	H	X	.	.	.	Q	E	R	V	D	Y	C	S	F	H	H	E	A	L	A	H	L	K	A	L	C	P	.	.	.	.	.	D	V	K	I	T	Y	L	F	N	Y	X	G	Q	P	T	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T	T		.	.	.	G	G	G						S	S												T	.	.	.	.	.	T									T	T	S					T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.																							.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.					.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		A	M	K	Q	V	A	E	Y	A	D	G	I	G	P	D	Y	H	M	L	I	E	E	T	S	Q	P	G	N	I	K	L	T	G	M	V	Q	D	A	Q	Q	N	K	L	V	V	H	P	Y	T	V	.	.	.	.	R	S	D	K	L	P	E	Y	T	P	D	V	N	Q	L	Y	D	A	L	Y	N	K	A	G	V	N
Query Conservation																																																				.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																										.	.	.	.									.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	D	F	V	E	Q	A	C	Y	G	D	A	N	G	V	S	X	L	F	H	Y	L	T	K	E	Q	V	C	T	A	H	E	K	G	L	S	V	T	V	W	X	P	W	I	F	D	D	S	E	E	D	W	K	K	.	.	.	.	.	.	.	.	.	.	.	C	L	E	L	Q	V	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	T								T	T		S						G	G	G												T	T									T	T											.	.	.	.	.	.	.	.	.	.	.					T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.												.	.	.	.	.	240	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	F	T	D	F	P	D	K	A	V	K	F	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	C	S	N	Y	P	F	G	L	X	N	F	L	S
Template Known Secondary structure						S										T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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