Job Description P09394 Confidence 100.00% Date Thu Jan 5 11:02:21 GMT 2012 Rank 19 Aligned Residues 247 % Identity 16% Template c2f9rC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:sphingomyelinase d 1; PDBTitle: crystal structure of the inactive state of the smase i, a2 sphingomyelinase d from loxosceles laeta venom Resolution 1.85 Å

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		26	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure									.																																																				.	.
Query SS confidence									.																																																				.	.
Query Sequence		A	D	S	N	E	K	I	.	V	I	A	H	R	G	A	S	G	Y	L	P	E	H	T	L	P	A	K	A	M	A	Y	A	Q	G	A	D	Y	L	E	Q	D	L	V	M	T	K	D	D	N	L	V	V	L	H	D	H	Y	L	D	.	.	R	V	T	D	V	A	D	R	F	P	D	R	A	R	K	D	G	R	Y
Query Conservation									.																																																				.	.
Alig confidence									.						.	.	.	.	.	.	.																																								.	.					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	N	R	R	P	I	W	N	L	A	H	M	.	.	.	.	.	.	.	V	N	A	V	A	Q	I	P	D	F	L	D	L	G	A	N	A	L	E	A	D	V	T	F	K	G	S	V	P	T	Y	T	Y	H	G	T	P	C	D	F	G	R	D	C	I	.	.	.	.	.	.	.	.	.	.	.	.	R	W	E
Template Known Secondary structure				S	S								S		.	.	.	.	.	.	.			S	T	T									T		S										T	T									S	S			T	T	S		S		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.								.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.													.	60	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	I	D	F	T	L	D	E	I	K	S	L	K	F	T	E	G	F	D	I	E	N	G	K	K	V	Q	T	Y	P	G	R	F	P	M	G	K	S	D	F	R	V	H	T	F	E	E	E	I	E	F	V	Q	G	L	N	H	S	T	G	K	N	I	G	I	Y	P	E	I	K	A	P	W	F	H	H	Q	E	G
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	F	N	V	F	L	K	T	L	R	E	Y	T	T	P	G	N	A	K	Y	R	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	L	F	V	L	D	L	K	T	G	S	L	S	N	D	Q	V
Template Known Secondary structure														T	S	T	T	S	T	T			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.																																								.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.															.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	D	I	A	A	K	T	L	E	V	L	K	K	Y	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	K	D	D	K	V	Y	L	Q	C	F	D	A	D	E	L	K	R	I	K	N	E	L	E	P	K	M	G	M	E	L	N	L	V	Q	L	I	A	Y	T	D	W	N	E	T	Q	Q	K	Q
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	P	A	G	E	N	V	A	K	E	L	L	Q	N	Y	W	N	N	G	N	N	G	G	R	A	Y	V	V	L	S	L	P	D	I	G	H	Y	E	F	V	R	G	F	K	E	V	L	K	K	E	G	H	E	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	K	V	G	Y	D	F
Template Known Secondary structure																T	S	G	G	G	S	S											S		T	T															T	T		G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.																		.	.	160	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	G	S	W	V	N	Y	N	Y	D	W	M	F	K	P	G	A	M	K	Q	V	A	E	Y	A	D	G	I	G	P	D	Y	H	M	L	I	E	E	T	S	Q	P	G	N	I	K	L	T	G	M	V	Q	D	A	Q	Q	N	K	L	V	V	H	P	Y	T	V	R	S	D	K	L	P	E	Y	T	P	D	V	N
Query Conservation
Alig confidence																																																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		S	G	P	Y	L	P	S	L	P	T	L	D	A	T	H	E	A	Y	K	K	A	G	V	D	G	H	I	W	L	S	D	G	L	T	N	F	S	P	L	G	D	M	A	R	L	K	E	A	I	K	S	R	D	S	A	N	G	F	I	N	K	I	Y	Y	W	S	V	D	K	V	S	T	T	K	A	.	.	.	.	.
Template Known Secondary structure						S	S	S															T			S		B						S			S																	T	S	T	T									T	T			S							.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	Y	D	A	L	Y	N	K	A	G	V	N	G	L	F	T	D	F	P	D	K	A	V	K	F	L	N	K	E
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	A	L	D	V	G	V	D	G	I	M	T	N	Y	P	N	V	L	I	G	V	L	K	E	S
Template Known Secondary structure		.	.	.	.	.	.					T		S					S									T	T	S	T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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