 |
Job Description | P09394 | Confidence | 38.18% | Date | Thu Jan 5 11:02:21 GMT 2012 |
Rank | 108 | Aligned Residues | 91 |
% Identity | 12% | Template | c1a3wB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:pyruvate kinase; |
PDBTitle: pyruvate kinase from saccharomyces cerevisiae complexed with fbp, pg,2 mn2+ and k+
|
Resolution | 3.00 Å |
|
 |
  |   |
267 | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | |
. | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | |
|
. | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |
|
|
|  |  | . |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | Q | V | A | E | Y | A | D | G | I | G | P | D | Y | H | . |
M | L | I | E | E | T | S | Q | P | G | N | I | K | L | T | G | M | V | Q | D | A | Q | Q | N | K | L | V | V | H | P | Y | T | . |
. |
V | R | S | D | K | L | P | E | Y | T | P | D | V | N | Q | L | Y | D | A | L | Y | N | K | A | G | V | N | G | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |
|
| . | . |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |
|
|
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|   |
|
|
|
Template Sequence |   |
F | D | E | I | L | K | V | T | D | G | V | M | V | A | R | G | D | L | G | I | E | I | P | A | P | E | V | L | A | V | Q | K | K | L | I | A | K | S | N | L | A | G | K | P | V | I | C | A | T | Q | M | L | E | S | M | T | Y | N | P | R | P | T | R | A | E | V | S | D | V | G | N | A | I | L | D | G | A | D | C | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | S | S |  |  |  |  |
|  |  |  |  |  |  |  | T | T | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
| S | S | T | T | G | G | G | G | S |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . |
  |
  |   |
344 | . | . | |
|
|
|
|
|
|
. | . | . | 350 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | T | D | . |
. |
. |
. |
. |
. |
. |
F | P | D | K | A | V | K | F | L | N | K |
Query Conservation |   |
|
|
| . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|   |
|   |
|
|
|
|
|
|   |   |
|   |   |
Template Sequence |   |
M | L | S | G | E | T | A | K | G | N | Y | P | I | N | A | V | T | T | M | A | E |
Template Known Secondary structure |   |
| B | S | T | T | T | T | T |
| S |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|