Return to main results Retrieve Phyre Job Id

Job DescriptionP75764
Confidence100.00%DateThu Jan 5 12:13:53 GMT 2012
Rank7Aligned Residues240
% Identity19%Templated2b3ya1
SCOP infoThe "swivelling" beta/beta/alpha domain LeuD/IlvD-like LeuD-like
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   506...510.........520.........530.........540.........550.........560.........570.........580.....
Predicted Secondary structure 






















































Query SS confidence 















































































Query Sequence  YQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVS
Query Conservation                                 
     
   

 









 
         
        
     
Alig confidence 















































































Template Conservation       
   



  

 
                 

   

 









 
     
  

   
      
   
Template Sequence  DKLFFWNSKSTYIKSPPFFENLTLDLQPPKSIVDAYVLLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPREFNSYG
Template Known Secondary structure 

S



TT
SS



GGGTT

SS





B
S

BS

S


SSSTT

GGG


TG
Template Predicted Secondary structure 





















































Template SS confidence 















































































   631........640.........650.........660.........670.........680.........690.........700.........710
 
   586...590.. .......600.........610.........620......... 630.........640.........650..
Predicted Secondary structure 






...........




























..







Query SS confidence 






. . . . . . . . . . .




































. .






















Query Sequence  RSKATAE. . . . . . . . . . . LENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIG. . SMVYAVKPGDGSAREQAASCQRV
Query Conservation         ...........  
    
     
             
         ..




 


 




 


   
Alig confidence 






...........





.





























..






















Template Conservation    


  

 





  
 
   .      
     
    
 
 
  
   
   




 


 




 

 
   
Template Sequence  SRRGNDAVMARGTFANIRLLNRFL. NKQAPQTIHLPSGEILDVFDAAERYQQAGLPLIVLAGKEYGAGSSRDWAAKGPFL
Template Known Secondary structure  GGTT
TTT

TT
TTT.T
STTTTTT



SSBTBS


T
Template Predicted Secondary structure 








.
























Template SS confidence 















































































   711........720.........730.... .....740.........750.........760.........770.........780.........
 
   653......660.........670.........680......... 690.........700.........710.........720........
Predicted Secondary structure 















....


















Query SS confidence 




































. . . .






































Query Sequence  IGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFE. . . . VGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYM
Query Conservation 







 


 







  




 
       ....  
                 
   
    
         
Alig confidence 











.























....













.










....








Template Conservation 


 



 


.

   



 




 
    
   
   
 
   
     
.     
 
   .... 
  
    
Template Sequence  LGIKAVLAESYE. RIHRSNLVGMGVIPLEYLPGENADALGLTGQERYTIIIPENL. KPQMKVQVKLD. . . . TGKTFQAVM
Template Known Secondary structure  TTS
B
.T

TT

T

S
S



SS
.
TT
T....TS
Template Predicted Secondary structure 




.



















.




....

Template SS confidence 















































































   790.........800. ........810.........820.........830.........840... ......850.... .....860...
 
   729730.........740.........750..
Predicted Secondary structure 







Query SS confidence 























Query Sequence  ESLTAEEREIIKAGSLINFNKNRQ
Query Conservation     
  
 
    



  

 
 
Alig confidence 























Template Conservation     
  
 
 
 







 


Template Sequence  RFDTDVELTYFLNGGILNYMIRKM
Template Known Secondary structure 


STS
Template Predicted Secondary structure 






Template SS confidence 























   864.....870.........880.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions