Job Description P75764 Confidence 100.00% Date Thu Jan 5 12:13:53 GMT 2012 Rank 6 Aligned Residues 438 % Identity 21% Template c1l5jB_ PDB info PDB header:lyase Chain: B: PDB Molecule:aconitate hydratase 2; PDBTitle: crystal structure of e. coli aconitase b. Resolution 2.40 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		K	K	E	E	A	K	K	G	T	I	A	W	S	I	L	S	S	H	N	T	.	.	.	S	G	N	M	D	K	L	K	I	K	F	D	S	L	A	S	H	D	I	T	F	V	G	I	V	Q	T	A	K	A	S	G	M	E	R	F	P	L	P	Y	V	L	T	N	C	H	N	S	L	C	A	V	G	G	T	I	N
Query Conservation																						.	.	.
Alig confidence																						.	.	.																																																								.
Template Conservation																																																																																.
Template Sequence		V	A	E	S	D	R	G	F	S	L	A	Q	K	M	V	G	R	A	C	G	V	K	G	I	R	P	G	A	Y	C	E	P	K	M	T	S	V	G	S	Q	D	T	T	G	P	M	T	R	D	E	L	K	D	L	A	C	L	G	F	S	A	D	L	V	M	Q	S	F	C	H	T	A	A	Y	P	K	P	V	.	D
Template Known Secondary structure							S													T	T	S	S				T	T						B		S						T	T	T											T	T		S	S			S	S								S	S	S	S	S					.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.		.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		G	D	D	H	V	F	G	L	S	A	A	Q	R	Y	G	G	I	F	V	P	P	H	I	A	V	I	H	Q	Y	M	R	E	M	M	A	G	G	G	K	M	I	L	G	S	D	S	H	T	R	Y	.	G	A	L	G	T	M	A	V	G	E	G	G	G	E	L	V	K	Q	L	L	N	D	T	W	D	I	D	Y	P
Query Conservation																																																				.
Alig confidence																																.																				.				.	.	.
Template Conservation																																.																								.	.	.
Template Sequence		V	N	T	H	H	T	L	P	D	F	I	M	N	R	G	G	V	S	L	R	P	G	D	G	V	I	H	S	W	L	.	N	R	M	L	L	P	D	T	V	G	T	G	G	D	S	H	T	R	F	P	I	G	I	.	.	.	S	F	P	A	G	S	G	L	V	A	F	A	A	A	T	G	V	M	P	L	D	M	P
Template Known Secondary structure														T	T	T						T	T	S	B							.	G	G	G			T	T						S	S	T	T				S	S	S		.	.	.																S	B
Template Predicted Secondary structure																																.																								.	.	.
Template SS confidence
		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.		.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.				.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.													.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	V	A	V	H	L	T	G	K	P	A	P	Y	V	G	P	Q	D	V	A	L	A	I	I	G	A	V	F	K	N	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	V	K	N	K	V	M	E	F	V	G	P	G	V	S	A	L	S	T	D	F	R	N	S	V	D	V	M	T	T	E	T	T	C	L	S
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.		.									.	.
Template Conservation																																																.									.	.
Template Sequence		E	S	V	L	V	R	F	K	G	K	M	Q	P	G	I	T	L	R	D	L	V	H	A	I	P	L	Y	A	I	K	Q	G	L	L	T	V	E	K	K	G	K	K	N	I	F	S	.	G	R	I	L	E	I	E	G	.	.	L	P	D	L	K	V	E	Q	A	F	E	L	T	D	A	S	A	E	R	S	A	A	G
Template Known Secondary structure										S				T	T																		T	S	B		S		S	T	T			B	T	T	T	.	T	S						S	.	.		T	T												G	G	G	G	G	T		S
Template Predicted Secondary structure																																																.									.	.
Template SS confidence
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.		.	.	.	.	580	.	.	.			.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270																												.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query Sequence		S	V	W	Q	T	D	E	E	V	H	N	W	L	A	L	H	G	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	Y	C	Q	L	N	P	Q	P	M	A	Y	Y	D	G	C	I	S	V	D	L	S	A	I	.	K	P	M	I	A	L	P	F
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation
Template Sequence		C	T	I	K	L	N	K	E	P	I	I	E	Y	L	N	S	N	I	V	L	L	K	W	M	I	A	E	G	Y	G	D	R	R	T	L	E	R	R	I	Q	G	M	E	K	W	L	A	N	P	E	L	L	E	A	D	A	D	A	E	Y	A	A	V	I	D	I	D	L	A	D	I	K	E	P	I	L	C	A	P	N
Template Known Secondary structure																													T		B																		S								T	T				S							G	G	G			S						T	T
Template Predicted Secondary structure
Template SS confidence
		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	S	N	V	Y	E	I	D	T	L	N	Q	N	L	T	D	I	L	R	E	I	E	I	E	S	E	R	V	A	H	G	K	A	K	L	S	L	L	D	K	V	E	N	G	R	L	K	V	Q	Q	G	I	I	A	G	C	S	G	G	N	Y	E	N	V	I	A	A	A	N	A	L	R	G	Q	S	C	G	N	D
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		D	P	D	D	A	R	P	L	S	A	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	K	I	D	E	V	F	I	G	S	C	M	T	.	N	I	G	H	F	R	A	A	G	K	L	L	D	A	H	K	G	Q	L	P
Template Known Secondary structure			T	T									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		B		S						S	T	T		.															S		S			S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		687	.	.	690	.	.	.	.	.	.	.	.																																		.	700	.	.	.	.	.	.	.	.	.	710	.	.		.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	S	L	A	V	Y	P	S	S	Q	P	V	F	M	D	L	A	K	K	G	V	V	A	D	L	I	G	A	G	A	I	I	R	T	A	F	C	G	P	C	F	G	A	G	D	T	P	I	N	N	G	L	S	I	R	H	T	T	R	N	F	P	N	R	E	G	S	K	P	A	N	G	Q	M	S	A	V	A	L
Query Conservation
Alig confidence		.																																																																				.
Template Conservation		.																																																																				.
Template Sequence		.	T	R	L	W	V	A	P	P	T	R	M	D	A	A	Q	L	T	E	E	G	Y	Y	S	V	F	G	K	S	G	A	R	I	E	I	P	G	C	S	L	C	M	G	N	Q	A	R	V	A	D	G	A	T	V	V	S	T	S	T	R	N	F	P	N	R	L	G	T	.	G	A	N	V	F	L	A	S	A	E	L
Template Known Secondary structure		.	S							S	B										T	T									T						S	S		G	G	G	T		S	S	S				T	T							S	S				T	T	S	S	S	T	.	T
Template Predicted Secondary structure		.																																																																				.
Template SS confidence
			733	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.		800	.	.	.	.	.	.	.	.	.	810
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	A	R	S	I	A	A	T	A	A	N	G	G	Y	L	T	S	A	S	E	L	D	C	W	D	N	V	P	E	Y	A	F	D	V	T	P	Y	K	N	R	V	Y	Q	G	F	V	K	G
Query Conservation
Alig confidence																																	.	.	.
Template Conservation																																	.	.	.
Template Sequence		A	A	V	A	A	L	I	G	K	L	P	T	P	E	E	Y	Q	T	Y	V	A	Q	V	D	K	T	A	V	D	T	Y	.	.	.	R	Y	L	N	F	N	Q	L	S	Q	Y	T	E	K	A
Template Known Secondary structure									S	B													T	T	S	T	T					T	.	.	.					G	G	G
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		811	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.				.	.	.	.	.	.	.	.	850	.	.	.	.	.	.