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Job DescriptionQ46911
Confidence100.00%DateThu Jan 5 12:35:48 GMT 2012
Rank12Aligned Residues432
% Identity14%Templatec3popD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:gilr oxidase; PDBTitle: the crystal structure of gilr, an oxidoreductase that catalyzes the2 terminal step of gilvocarcin biosynthesis
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70.........80.........90.........100.........110.....
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Query Sequence  FRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIEN
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Template Sequence  YIELSHSDNHRFVVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTP. RRDLVLDLHNLHAI. GPAADG
Template Known Secondary structure  T

SSTTS



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SSTT

SS


SSSTTTSS.

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TT


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SSS
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   17..20.........30.........40.........50.........60.........70.... .....80........ .90....
 
   116...120.........130.........140.........150.........160.........170.........180.........190.....
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Query Sequence  MQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPR
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Template Sequence  AGVRVGSGATVDQVQKALFRRWNAALP. LGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHAVEVAVVDESRTVRLVTAR
Template Known Secondary structure  SSTT
BSB


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SBTT
B



TT

GGGG
TTS
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   95....100.........110.........120. ........130.........140.........150.........160.........170...
 
   196...200. ...... ..210.........220.........230......... 240.........250....
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Query Sequence  RAAGPD. . . IRHIII. GNEGALCYITEVTVKIFKFTPENNLFYGYILE. . . . . . . . . . . . . . . . . DMKTGFNILREIMVE
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Template Sequence  ADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMIDETSFVTVMRRFFEWHER
Template Known Secondary structure  TT

TTTS
TTSS



TTT
BTTTTB
B

SGGG

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   174.....180.........190.........200.........210.........220.........230.........240.........250...
 
   255....260.........270.........280.........290.........300.........310.........320.........330....
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Query Sequence  GYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKVTGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVA
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Template Sequence  HSEPGSPES. . SLFATFFVNHVSSGVLQLMVQQDADVDPEGEILARFVASLTEGTGVVGIPRGGVMSWLTGTRYMSQADC
Template Known Secondary structure  S

TT
GGG..G
GGG
TTT
TT
SSSS


T
B
S
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   254.....260.. .......270.........280.........290.........300.........310.........320.........330.
 
   335....340.........350.........360.........370.........380........ .390.........400....
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Query Sequence  AERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSS. . . . . . . . . . HSYQNGTNMYFVYDYN
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Template Sequence  GDVM. . . . . GARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSYGGEINRRGPSDAAVPQRDSVVKSSWFSA
Template Known Secondary structure  GGGT.....T
SS


TSSS

TT

GGGGGS
TTTSS



S
S
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   332... ....340.........350.........360.........370.........380.........390.........400......
 
   405....410.........420.........430.........440.... .....450.........460......
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Query Sequence  VVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGK. . . . . . . . . . . . . . . . . . HRVHWSKLEHGSAWALLEGLKK
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Template Sequence  WQDAELDELHLGWLRGLYEEF. . . . FAGTGGVPVTGGRTDGCYINYPDADLLDPARNRSGEPWHHLYYKDNYARLRSAKR
Template Known Secondary structure  S
GGG....TGGGTTS

TTSSB



TTS

GGGG
TTT

SS

GGG
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   407..410.........420....... ..430.........440.........450.........460.........470.........480..
 
   467..470.........480.
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Query Sequence  QFDPNGIMNTGTIYP
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Template Sequence  AWDPLNTFHHSMSIG
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TT

S

TT


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   483......490.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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