Job Description Q46911 Confidence 100.00% Date Thu Jan 5 12:35:48 GMT 2012 Rank 1 Aligned Residues 452 % Identity 21% Template c3pm9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative dehydrogenase (rpa1076) from2 rhodopseudomonas palustris cga009 at 2.57 a resolution Resolution 2.57 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	I	V	D	Q	L	K	E	I	V	G	A	D	R	V	I	T	D	E	T	V	L	K	K	N	S	I	D	R	F	R	K	F	P	D	I	H	G	I	Y	T	L	P	I	P	A	A	V	V	K	L	G	S	T	E	Q	V	S	R	V	L	N	F	M	N	A	H	K	I	N	G	V	P	R	T	G	A	S	A
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.
Template Sequence		P	E	L	I	A	R	F	T	A	I	V	G	D	K	H	A	L	T	D	P	L	E	L	E	A	Y	I	T	E	.	.	.	.	.	.	.	.	E	R	N	L	Y	R	G	H	S	P	L	V	L	R	P	G	S	T	E	E	V	V	A	I	C	K	L	A	N	E	A	R	V	A	L	V	P	Q	G	G	N	T	G
Template Known Secondary structure														G	G	G				S									B		.	.	.	.	.	.	.	.	T	T				B				S							S															T							S	S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.									.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	G	G	L	E	T	V	V	E	N	S	V	V	L	D	G	S	A	M	N	Q	I	I	N	I	D	I	E	N	M	Q	A	T	A	Q	C	G	V	P	L	E	V	L	E	N	A	L	R	E	K	G	Y	T	T	G	H	S	P	Q	S	K	P	L	A	Q	M	G	G	L	V	A	T	R	S	I	G	Q	F	S
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		L	V	G	G	Q	T	P	H	.	N	G	E	V	V	I	S	L	K	R	X	D	K	I	R	E	I	D	T	S	S	N	T	I	T	V	E	A	G	A	I	L	Q	R	V	Q	E	K	A	A	E	V	D	R	L	F	P	L	S	L	G	A	Q	G	S	C	T	I	G	G	N	L	S	T	N	A	G	G	T	A	A
Template Known Secondary structure		S	S	S	T	T				.	S	S							T	T									T	T	T	T						T	T		B											T	T								T	T	T	T	T		B								T				T	T
Template Predicted Secondary structure										.
Template SS confidence
		86	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		T	L	Y	G	A	I	E	D	M	V	V	G	L	E	A	V	L	A	D	G	T	V	T	R	I	K	N	V	P	R	.	R	A	A	G	P	D	I	R	H	I	I	I	G	N	E	G	A	L	C	Y	I	T	E	V	T	V	K	I	F	K	F	T	P	E	N	N	L	F	Y	G	Y	I	L	E	D	M	K	T	G
Query Conservation																																.
Alig confidence																																.																																.
Template Conservation																																																																.
Template Sequence		L	A	Y	G	L	A	R	D	X	A	L	G	V	E	V	V	L	A	D	G	R	V	X	N	L	L	S	K	L	K	K	D	N	T	G	Y	D	L	R	D	L	F	I	G	A	E	G	T	L	G	I	I	T	A	A	T	L	K	L	F	P	K	.	P	R	A	V	E	T	A	F	V	G	L	Q	S	P	D	D	A
Template Known Secondary structure																			T	T	S										S				S	S								T	T	S	T	T	S	S														.		S										S
Template Predicted Secondary structure																																																																.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		245	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.								.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure											.																				.	.	.	.	.	.	.
Query SS confidence											.																				.	.	.	.	.	.	.
Query Sequence		F	N	I	L	R	E	I	M	V	.	E	G	Y	R	P	S	I	A	R	L	Y	D	A	E	D	G	T	Q	H	.	.	.	.	.	.	.	F	T	H	F	A	D	G	K	C	V	L	I	F	M	A	E	G	N	P	R	I	A	K	V	T	G	E	G	I	A	E	I	V	A	R	Y	P	Q	C	Q	R	V	D	S
Query Conservation											.																				.	.	.	.	.	.	.
Alig confidence											.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	L	L	G	I	A	Q	G	E	A	A	G	N	L	T	S	F	E	L	I	A	E	T	P	L	D	F	S	V	R	H	A	N	N	R	D	P	L	E	A	R	Y	P	W	Y	V	L	I	E	L	S	S	P	R	D	D	A	R	A	A	L	E	S	I	L	E	R	G	F	E	D	G	I	V	V	D	A	A	I
Template Known Secondary structure													G	G	G																			T	T					S	S	S			S										S	S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	I	E	T	W	F	N	N	L	N	W	G	P	D	K	V	A	A	E	R	V	Q	I	L	K	T	G	N	M	G	F	T	T	E	V	S	G	C	W	S	C	I	H	E	I	Y	E	S	V	I	N	R	I	R	T	E	F	P	H	A	D	D	I	T	M	L	G	G	H	S	S	H	S	Y	Q	N	G	T	N
Query Conservation
Alig confidence																	.	.	.	.																																																						.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.																																																						.	.	.	.	.	.	.	.
Template Sequence		A	N	S	V	Q	Q	Q	Q	A	F	W	K	L	R	E	.	.	.	.	E	I	S	P	A	Q	K	P	E	G	G	S	I	K	H	D	I	S	V	P	V	A	A	V	P	Q	F	I	E	Q	A	N	A	A	V	V	A	L	I	P	G	A	R	P	V	P	F	G	H	L	G	D	G	.	.	.	.	.	.	.	.
Template Known Secondary structure				S													.	.	.	.	T					T	G	G	G												G	G	G																S	T	T									G	G	G	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.																																																						.	.	.	.	.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.					.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.		.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		M	Y	F	V	Y	D	Y	N	V	V	D	C	K	P	E	E	E	I	D	K	Y	H	N	P	L	N	K	I	I	C	E	E	T	I	R	L	G	G	S	M	V	H	H	H	G	I	G	K	H	R	V	H	W	S	K	L	E	H	.	G	S	A	W	A	L	L	E	G	L	K	K	Q	F	D	P	N	G	I	M	N
Query Conservation																																																												.
Alig confidence		.																																																										.
Template Conservation		.
Template Sequence		.	N	I	H	Y	N	V	S	Q	P	V	G	A	D	K	A	E	F	L	A	R	W	H	D	V	S	Q	V	V	F	E	V	V	L	R	L	G	G	S	I	S	A	E	H	G	I	G	V	X	K	R	D	E	L	A	E	V	K	D	K	T	A	I	E	L	X	R	S	I	K	A	L	L	D	P	H	G	I	X	N
Template Known Secondary structure		.										T	T								T	T															T	T		B	S		S	S	S			T	T	T	T								S																	T	T	S		B	S
Template Predicted Secondary structure		.
Template SS confidence
			392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
		476	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	T	I	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	K	V	V
Template Known Secondary structure		T	T	S
Template Predicted Secondary structure
Template SS confidence
		471	.	.	.	.