Job Description Q46911 Confidence 100.00% Date Thu Jan 5 12:35:48 GMT 2012 Rank 9 Aligned Residues 463 % Identity 16% Template c3fwaA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:reticuline oxidase; PDBTitle: structure of berberine bridge enzyme, c166a variant in complex with2 (s)-reticuline Resolution 1.50 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		I	V	D	Q	L	K	E	I	V	G	A	D	R	V	I	T	D	E	T	V	L	K	K	N	S	I	D	R	.	F	R	K	F	P	D	I	H	G	I	Y	T	L	P	I	P	A	A	V	V	K	L	G	S	T	E	Q	V	S	R	V	L	N	F	M	N	A	H	K	I	N	G	V	P	R	T	G	A	S	A	T
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		L	L	S	C	L	T	F	N	G	V	R	N	H	T	V	F	S	A	D	S	D	S	D	F	N	R	F	L	H	L	S	I	Q	N	P	L	F	Q	N	S	L	I	S	K	P	S	A	I	I	L	P	G	S	K	E	E	L	S	N	T	I	R	C	I	R	K	G	S	W	T	I	R	L	R	S	G	G	H	S	Y
Template Known Secondary structure									T	T									S		T	T	S									T				G	G	G		S	T	T	S				S							S													T	T	T							S	S				T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	G	L	E	T	V	V	E	N	S	V	V	L	D	G	S	A	M	N	Q	I	I	N	I	D	I	E	N	M	Q	A	T	A	Q	C	G	V	P	L	E	V	L	E	N	A	L	R	E	K	G	Y	T	T	G	H	S	P	Q	S	K	P	L	A	Q	M	G	G	L	V	A	T	R	S	I	G	Q	F	S	T
Query Conservation
Alig confidence																								.
Template Conservation																								.
Template Sequence		E	G	L	S	Y	T	S	D	T	P	F	I	L	I	D	L	M	N	L	N	R	V	.	S	I	D	L	E	S	E	T	A	W	V	E	S	G	S	T	L	G	E	L	Y	Y	A	I	T	E	S	S	S	K	L	G	F	T	A	G	W	A	P	T	V	G	T	G	G	H	I	S	G	G	G	F	G	M	M	S	R
Template Known Secondary structure		T		T	T	S			S	S								T	T					.				T	T	T	T						T	T		B													S	S							S		T	T	S	B							T					T	T
Template Predicted Secondary structure																								.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		L	Y	G	A	I	E	D	M	V	V	G	L	E	A	V	L	A	D	G	T	V	T	R	I	K	N	V	P	R	R	A	A	G	P	D	I	R	H	I	I	I	.	G	N	E	G	A	L	C	Y	I	T	E	V	T	V	K	I	F	K	F	T	P	E	N	N	L	F	Y	G	Y	I	L	E	D	M	K	T	G	F
Query Conservation																																											.
Alig confidence																											.	.	.	.	.												.
Template Conservation																											.	.	.	.	.
Template Sequence		K	Y	G	L	A	A	D	N	V	V	D	A	I	L	I	D	A	N	G	A	I	L	D	R	Q	.	.	.	.	.	A	M	G	E	D	V	F	W	A	I	R	G	G	G	G	G	V	W	G	A	I	Y	A	W	K	I	K	L	L	P	V	P	E	K	V	T	V	F	R	V	T	K	N	V	A	I	D	E	A	T
Template Known Secondary structure						G	G	G	G									T	T								.	.	.	.	.											T	T	S		T	T	S	S															S
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210						.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	L	R	E	I	M	V	E	G	Y	R	P	S	I	A	R	L	Y	D	A	E	D	G	T	Q	H	F	T	H	F	A	D	G	K	C	V	L	I	F	M	A	E	G	N	P	R	I	A	K	V	T	G	E	G	I	A	E	I	V	A	R	Y	P	Q	C	Q	R	V	D	S	K	L	I	E	T	W	F	N	N
Query Conservation
Alig confidence										.	.	.	.																																																		.	.
Template Conservation										.	.	.	.																																																		.	.
Template Sequence		S	L	L	H	K	W	Q	F	.	.	.	.	V	A	E	E	L	E	E	D	F	T	L	S	V	L	G	G	A	D	E	K	Q	V	W	L	T	M	L	G	F	H	F	G	L	K	T	V	A	K	S	T	F	D	L	L	F	P	E	L	G	.	.	L	V	E	E	D	Y	L	E	M	S	W	G	E	S	F	A	Y
Template Known Secondary structure										.	.	.	.					S		T	T											T	T											S	S														G	G	G		.	.			G	G	G
Template Predicted Secondary structure										.	.	.	.																																																		.	.
Template SS confidence
		261	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.			.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	W	G	P	D	K	V	A	A	E	R	V	Q	I	L	K	T	G	N	M	G	F	T	T	E	V	S	G	C	W	S	C	I	H	E	I	Y	E	S	V	I	N	R	I	R	T	E	F	P	H	A	D	D	I	T	M	L	G	G	H	S	S	H	S	Y	Q	N	G	T	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	G	L	E	T	V	S	Q	L	N	N	R	F	L	K	F	D	E	R	A	F	K	T	K	V	D	L	T	K	E	P	L	P	S	K	A	F	Y	G	L	L	E	R	L	S	K	E	P	N	G	F	I	A	L	N	G	F	G	G	Q	M	S	K	I	S	S	D	F	T	P	F	P	H	R	S	G	T	R	L
Template Known Secondary structure			T	T		S		G	G	G	G	G		T	T	S		S													S	S																T		T	T										G	G	G	G	T	S		T	T	S	S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.																		.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	M	Y	F	V	Y	D	Y	N	V	V	D	C	K	P	E	E	E	I	D	K	Y	H	N	P	L	N	K	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	E	E	T	I	R	L	G	G	S	M	V	H	H	H	G	I	G	K	H	R	V	H	W	S	K	L	E	H	G	S	A	W
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	V	E	Y	I	V	A	W	N	Q	S	E	Q	K	K	K	T	E	F	L	D	W	L	E	K	V	Y	E	F	M	K	P	F	V	S	K	N	P	R	L	G	Y	V	N	H	I	D	L	D	L	G	G	I	D	W	G	N	K	T	V	V	N	N	A	I	E	I	S	R	S	W	G	E	S	Y	F	L	S	N	Y
Template Known Secondary structure											G	G	G	G	G	G																T	T	T	S			S	S					G	G	G			G	G	G					T	T							T														G	G	G
Template Predicted Secondary structure
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	E	G	L	K	K	Q	F	D	P	N	G	I	M	N	T	G	T	I	Y	P	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	L	I	R	A	K	T	L	I	D	P	N	N	V	F	N	H	P	Q	S	I	P	P
Template Known Secondary structure													T	T			S			T	T
Template Predicted Secondary structure
Template SS confidence
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.