 |
Job Description | Q46911 | Confidence | 95.73% | Date | Thu Jan 5 12:35:48 GMT 2012 |
Rank | 43 | Aligned Residues | 88 |
% Identity | 7% | Template | c3etrM_ |
PDB info |
PDB header:oxidoreductase | Chain: M: PDB Molecule:xanthine dehydrogenase/oxidase; |
PDBTitle: crystal structure of xanthine oxidase in complex with2 lumazine
|
Resolution | 2.20 Å |
|
 |
  |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | I | Y | T | L | P | I | P | A | A | V | V | K | L | G | S | T | E | Q | V | S | R | V | L | N | F | M | N | A | H | K | I | N | G | V | P | R | T | G | A | S | A | T | . |
E | G | G | L | E | T | V | V | E | N | S | V | V | L | D | G | S | A | M | N | Q | I | I | N | I | D | I | E | N | M | Q | A | T | A | Q | C |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|
|   |
|   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   | . |   |
|   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |
|
|   |   |
|
|   | . | . | . |   |   |   | . |   |
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|
|
|
Template Sequence |   |
Q | L | R | F | E | G | E | R | V | T | W | I | Q | A | S | T | L | K | E | L | L | D | L | K | A | . |
. |
. |
Q | H | P | . |
E | A | K | L | V | V | G | N | T | E | I | G | I | E | M | K | F | K | N | Q | L | F | P | M | I | I | C | P | A | W | I | P | E | L | N | A | V | E | H | G | P | E | G | I | S | F | G | A |
Template Known Secondary structure |   |
|  |  |  |  |
| S | S |
|  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  | . | . | . |  |
| T | . | T |
|  |  |
| S | S |
| T | T |  |  |  |  |  |  |  | S |
|
|
|
| S |  |  |  |  |
| T | T |
| S | S | S | S |
|  |  |  |
| S | S |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  | . | . | . |  |
|
| . |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
226 | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | |
|
|
. | . | . | |
. | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . |
  |
  |   |
123 | . | . | . | . | . | . | 130 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | V | P | L | E | V | L | E | N | A | L | R | E |
Query Conservation |   |
|
|   |   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
A | C | A | L | S | S | V | E | K | T | L | L | E |
Template Known Secondary structure |   |
T |
| B |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
302 | . | . | . | . | . | . | . | 310 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|