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Job DescriptionQ46911
Confidence100.00%DateThu Jan 5 12:35:48 GMT 2012
Rank16Aligned Residues433
% Identity15%Templatec2y3rC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:taml; PDBTitle: structure of the tirandamycin-bound fad-dependent2 tirandamycin oxidase taml in p21 space group
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70.........80.........90.........100.........110.....
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Query Sequence  FRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIEN
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Template Sequence  YEDLRRGENLRFVGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANS. DVRVVMDMSRLSAV. GFDEER
Template Known Secondary structure  T

S
TT




S

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SSSTTT
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TT


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   14.....20.........30.........40.........50.........60.........70. ........80..... ....90.
 
   116...120.........130.........140.........150.........160.........170.........180...... ...190...
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Query Sequence  MQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGT. . VTRIKNV
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Template Sequence  GAFAVEAGATLGAVYKTLFRVWGVTLPGG. ACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVEVVVVDASGDARTVIAT
Template Known Secondary structure  TTT
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.S
TT
BTT


TT

GGGG
TTS
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   92.......100.........110.........120 .........130.........140.........150.........160.........170
 
   194 .....200........ .210.........220.........230 .........240.........250... ....
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Query Sequence  P. RRAAGPDIRHIIIG. NEGALCYITEVTVKIFKFTPEN. . . . . . . . . . . . . NLFYGYILEDMKTGFNILREIMV. EGYR
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Template Sequence  REPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEPPEPGRLLPRPPAEVLLNTTVWPWEGLDEAAFARLVRNHGRWFEQN
Template Known Secondary structure  S
TT
TTTTTS
TTSS







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SSTT

S
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   171........180.........190.........200.........210.........220.........230.........240.........250
 
   258.260.........270.........280.........290.........300.........310.........320.........330.......
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Query Sequence  PSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKVTGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAER
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Template Sequence  SGPDSPWCDLYSVLALTRSQSGALAMTTQLDATGPDAEKRLETYLAAVSEGVGVQPHSDTRRLPWLHSTRWPGIAGDG. .
Template Known Secondary structure 
STT
GGGG
GGGS

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   254.....260.........270.........280.........290.........300.........310.........320.........330.
 
   338.340.........350.........360.........370.........380......... 390.........400.......
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Query Sequence  VQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSH. . . . . . . . . . SYQNGTNMYFVYDYNVVD
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Template Sequence  . . . . DMTGRAKIKAAYARRSFDDRQIGTLYTRLTSTDDNPAGVVALIAYGGKVNAVPADRTAVAQRDSILKIVYVTTWED
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SSS







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GGGGGS
TTSSS



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   332.......340.........350.........360.........370.........380.........390.........400.......
 
   408.410.........420.........430.........440... ......450.........460.........
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Query Sequence  CKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIG. . . . . . . . . . . . . . . . . . KHRVHWSKLEHGSAWALLEGLKKQFD
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Template Sequence  PAQDPVHVRWIRELYRDV. . . . YADTGGVPVPGGAADGAYVNYPDVDLADEEWNTSGVPWSELYYKDAYPRLQAVKARWD
Template Known Secondary structure  TT
....TGGGTTS

TTTTB



TTS

GGGG
TTT

SS

GGG
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   409410.........420...... ...430.........440.........450.........460.........470.........480....
 
   470.........480.
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Query Sequence  PNGIMNTGTIYP
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Template Sequence  PRNVFRHALSVR
Template Known Secondary structure  TT

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   485....490......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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